LOCUS BC023554 2675 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coproporphyrinogen oxidase, mRNA (cDNA clone MGC:19736
IMAGE:3607724), complete cds.
ACCESSION BC023554
VERSION BC023554.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2675)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2675)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC023554.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41393598.
FEATURES Location/Qualifiers
source 1..2675
/db_xref="H-InvDB:HIT000050825"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19736 IMAGE:3607724"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2675
/gene="CPOX"
/gene_synonym="CPX"
/gene_synonym="HCP"
/db_xref="GeneID:1371"
/db_xref="HGNC:HGNC:2321"
/db_xref="MIM:121300"
CDS 55..1419
/gene="CPOX"
/gene_synonym="CPX"
/gene_synonym="HCP"
/codon_start=1
/product="coproporphyrinogen oxidase"
/protein_id="AAH23554.1"
/db_xref="GeneID:1371"
/db_xref="HGNC:HGNC:2321"
/db_xref="MIM:121300"
/translation="MALQLGRLSSGPCWLVARGGCGGPRAWSQCGGGGLRAWSQRSAA
GRVCRPPGPAGTEQSRGLGHGSTSRGGPWVGTGLAAALAGLVGLATAAFGHVQRAEML
PKTSGTRATSLGRPEEEEDELAHRCSSFMAPPVTDLGELRRRPGDMKTKMELLILETQ
AQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSISVVHGNLSEEA
AKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGNKQWW
FGGGCDLTPTYLNQEDAIHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGI
GGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRY
VEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENSKEAEILEVLRHPR
DWVR"
BASE COUNT 682 a 533 c 691 g 769 t
ORIGIN
1 ctcaaacgca gggctctggg acgcaggcac tgctccaggt gatagtgcgg gaacatggcc
61 ttgcagctgg gcaggctgag ctcgggcccc tgctggctcg tggcgcgggg cggctgcgga
121 gggccccgcg cctggtccca gtgcggcggc ggagggctcc gagcctggtc ccagcgcagc
181 gcagccggac gcgtctgccg gccccctggc ccggctggca cggagcagag ccgcgggctg
241 gggcacggct cgacgtcgag aggcggcccc tgggtgggga cagggctggc cgcggcgctg
301 gcggggttgg tggggctggc caccgccgcc ttcgggcatg tgcagcgggc ggagatgttg
361 cctaagacct cggggacgcg ggccacttcg ctggggaggc cggaggagga ggaggatgag
421 ctggcccacc gctgcagcag cttcatggcc ccgcctgtga ccgacctggg cgagctgcga
481 aggaggccgg gcgacatgaa gaccaagatg gagctgctga ttctggagac ccaggcccag
541 gtgtgccagg ctctggcaca ggtagacggg ggcgccaact tttctgtgga ccggtgggag
601 aggaaggaag gaggtggcgg catcagctgt gtacttcaag atgggtgtgt tttcgaaaag
661 gctggggtga gcatttctgt tgttcatgga aatctttcag aggaagctgc aaaacaaatg
721 agaagcagag gaaaagttct gaagactaaa gatggtaaat tgccattttg tgctatgggc
781 gtgagctctg ttatccaccc caagaatcct catgctccta ctatccattt caactacaga
841 tactttgaag tagaagaagc tgatggcaac aagcagtggt ggtttggtgg tggatgtgac
901 ctcactccaa catacttgaa tcaagaagac gctatccatt ttcacagaac tctgaaggag
961 gcttgtgacc agcatggtcc agatctctac cccaaattta aaaaatggtg tgatgattac
1021 ttctttatag cccatcgtgg agaacggcgg ggcattggtg gtatcttttt tgatgatctt
1081 gactctccgt ccaaggagga ggtgtttcgc tttgtacaga gctgtgccag ggctgtagtt
1141 ccttcttaca ttccccttgt gaaaaagcac tgtgatgact cattcacccc ccaggagaag
1201 ctgtggcagc agctcagaag aggacggtat gtagaattta atctgctgta tgatcggggc
1261 acaaagtttg gcctcttcac tccaggatcc agaattgaaa gtatcttgat gtctttacct
1321 ctaactgccc gatgggagta catgcattca ccctcagaga attccaaaga agctgaaatt
1381 ctggaagttc tacgccatcc aagggactgg gtgcgttgat gcaggcagaa tggctgtgca
1441 ggggtttgga gggcacacga tgtgtgctcc ccatgccact ggtcggcact ttgccactgt
1501 gtggcagtta cccgtgcctt agtcttctcc actctgcacc ctacctcgtg ggcagatgat
1561 aacatgtttt ggatgctgtc cgtgatgaat ggtgagatgg cagattgtca gagtcaattg
1621 attaaacctc atttatactt ctagtgtcat tttatatgac tagtttacaa aataggacat
1681 tgagtttcca agtattgaga taagggaata taaatagtat tatatgtatc aggaaatctc
1741 tcatcttgtt tttgtttcat gtatttttta aagttttcat ttgtgccaca aaaatctgtc
1801 gtggaatata ttttattttc attaattcag tgaagttgag acttcatagt aattttagaa
1861 tgcaacttga aggtaaaaat tttactttgt caatactgaa gtctctgctg taatccttat
1921 atatctttct ccagagaaca taatattgtc aaatagatac acatttttct aataggtatt
1981 tagaagcact tgaaatattc ttaatctctg catgtgttac aattcagtta tttctgtagt
2041 ttgtaaactc taaagtgaca ttactattat tttagagatg tctaagttgt aattttgatt
2101 tttgtggaac cattgtttgt taatgttggg attctctgca cttttgaatg tgaaagctta
2161 tatccctgaa ttctgatact taagagtttt ctatttcaga catctctgtg tggaagttga
2221 gactaagaat aatcctaggg atgtcatgaa tttaggcaat gtttctcatt tggaaaatga
2281 aatgagaaat aatttccttc tttaaagcaa gtatatatag tatgagaaac ttggaggcat
2341 ttcatacaca catttcttag gaaaatggac acattgaaaa tgtcctcttt tttatattag
2401 agattctgca gctctttgct cttaagagca aatcacaaca ggattcttaa tgtatgattt
2461 ctttgttcat atattatgaa tgtattattt tatttgcttc gtaataaagt ttataaggaa
2521 gagcatctca tacatatcat tatcgtggaa cacgttgaat gtttgtgatt ctgtgtggcc
2581 tttttggggc tggaaaatgt atgaattctt caactgtctt acaagagatc tgctaataaa
2641 ttttattatt aaataagaaa aaaaaaaaaa aaaaa
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