LOCUS BC023551 2720 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coproporphyrinogen oxidase, mRNA (cDNA clone MGC:19660
IMAGE:3161428), complete cds.
ACCESSION BC023551
VERSION BC023551.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2720)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2720)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC023551.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41393598.
FEATURES Location/Qualifiers
source 1..2720
/db_xref="H-InvDB:HIT000050822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19660 IMAGE:3161428"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2720
/gene="CPOX"
/gene_synonym="CPX"
/gene_synonym="HCP"
/db_xref="GeneID:1371"
/db_xref="HGNC:HGNC:2321"
/db_xref="MIM:121300"
CDS 94..1458
/gene="CPOX"
/gene_synonym="CPX"
/gene_synonym="HCP"
/codon_start=1
/product="coproporphyrinogen oxidase"
/protein_id="AAH23551.1"
/db_xref="GeneID:1371"
/db_xref="HGNC:HGNC:2321"
/db_xref="MIM:121300"
/translation="MALQLGRLSSGPCWLVARGGCGGPRAWSQCGGGGLRAWSQRSAA
GRVCRPPGPAGTEQSRGLGHGSTSRGGPWVGTGLAAALAGLVGLATAAFGHVQRAEML
PKTSGTRATSLGRPEEEEDELAHRCSSFMAPPVTDLGELRRRPGDMKTKMELLILETQ
AQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSISVVHGNLSEEA
AKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGNKQWW
FGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGI
GGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRY
VEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENSKEAEILEVLRHPR
DWVR"
BASE COUNT 688 a 544 c 711 g 777 t
ORIGIN
1 agctcgccgg ctcaatactc cgggggtctg ggtggggggc tcaaacgcag ggctctggga
61 cgcaggcact gctccaggtg atagtgcggg aacatggcct tgcagctggg caggctgagc
121 tcgggcccct gctggctcgt ggcgcggggc ggctgcggag ggccccgcgc ctggtcccag
181 tgcggcggcg gagggctccg agcctggtcc cagcgcagcg cagccggacg cgtctgccgg
241 ccccctggcc cggctggcac ggagcagagc cgcgggctgg ggcacggctc gacgtcgaga
301 ggcggcccct gggtggggac agggctggcc gcggcgctgg cggggttggt ggggctggcc
361 accgccgcct tcgggcatgt gcagcgggcg gagatgttgc ctaagacctc ggggacgcgg
421 gccacttcgc tggggaggcc ggaggaggag gaggatgagc tggcccaccg ctgcagcagc
481 ttcatggccc cgcctgtgac cgacctgggc gagctgcgaa ggaggccggg cgacatgaag
541 accaagatgg agctgctgat tctggagacc caggcccagg tgtgccaggc tctggcacag
601 gtagacgggg gcgccaactt ttctgtggac cggtgggaga ggaaggaagg aggtggcggc
661 atcagctgtg tacttcaaga tgggtgtgtt ttcgaaaagg ctggggtgag catttctgtt
721 gttcatggaa atctttcaga ggaagctgca aaacaaatga gaagcagagg aaaagttctg
781 aagactaaag atggtaaatt gccattttgt gctatgggcg tgagctctgt tatccacccc
841 aagaatcctc atgctcctac tatccatttc aactacagat actttgaagt agaagaagct
901 gatggcaaca agcagtggtg gtttggtggt ggatgtgacc tcactccaac atacttgaat
961 caagaagacg ctgtccattt tcacagaact ctgaaggagg cttgtgacca gcatggtcca
1021 gatctctacc ccaaatttaa aaaatggtgt gatgattact tctttatagc ccatcgtgga
1081 gagcggcggg gcattggtgg tatctttttt gatgatcttg actctccgtc caaggaggag
1141 gtgtttcgct ttgtacagag ctgtgccagg gctgtagttc cttcttacat tccccttgtg
1201 aaaaagcact gtgatgactc attcaccccc caggagaagc tgtggcagca gctcagaaga
1261 ggacggtatg tagaatttaa tctgctgtat gatcggggca caaagtttgg cctcttcact
1321 ccaggatcca gaattgaaag tatcttgatg tctttacctc taactgcccg atgggagtac
1381 atgcattcac cctcagagaa ttccaaagaa gctgaaattc tggaagttct acgccatcca
1441 agggactggg tgcgttgatg caggcagaat ggctgtgcag gggtttggag ggcacacgat
1501 gtgtgctccc catgccactg gtcggcactt tgccactgtg tggcagttac ccgtgcctta
1561 gtcttctcca ctctgcaccc tacctcgtgg gcagatgata acatgttttg gatgctgtcc
1621 gtgatgaatg gtgagatggc agattgtcag agtcaattga ttaaacctca tttatacttc
1681 tagtgtcatt ttatatgact agtttacaaa ataggacatt gagtttccaa gtattgagat
1741 aagggaatat aaatagtatt atatgtatca ggaaatctct catcttgttt ttgtttcatg
1801 tattttttaa agttttcatt tgtgccacaa aaatctgtcg tggaatatat tttattttca
1861 ttaattcagt gaagttgaga cttcatagta attttagaat gcaacttgaa ggtaaaaatt
1921 ttactttgtc aatactgaag tctctgctgt aatccttata tatctttctc cagagaacat
1981 aatattgtca aatagataca catttttcta ataggtattt agaagcactt gaaatattct
2041 taatctctgc atgtgttaca attcagttat ttctgtagtt tgtaaactct aaagtgacat
2101 tactattatt ttagagatgt ctaagttgta attttgattt ttgtggaacc attgtttgtt
2161 aatgttggga ttctctgcac ttttgaatgt gaaagcttat atccctgaat tctgatactt
2221 aagagttttc tatttcagac atctctgtgt ggaagttgag actaagaata atcctaggga
2281 tgtcatgaat ttaggcaatg tttctcattt ggaaaatgaa atgagaaata atttccttct
2341 ttaaagcaag tatatatagt atgagaaact tggaggcatt tcatacacac atttcttagg
2401 aaaatggaca cattgaaaat gtcctctttt ttatattaga gattctgcag ctctttgctc
2461 ttaagagcaa atcacaacag gattcttaat gtatgatttc tttgttcata tattatgaat
2521 gtattatttt atttgcttcg taataaagtt tataaggaag agcatctcat acatatcatt
2581 atcgtggaac acgttgaatg tttgtgattc tgtgtggcct ttttggggct ggaaaatgta
2641 tgaattcttc aactgtctta caagagatct gctaataaat tttattatta aataagacta
2701 aaaaaaaaaa aaaaaaaaaa
//