LOCUS BC023512 1588 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens CCR4 carbon catabolite repression 4-like (S. cerevisiae), mRNA (cDNA clone IMAGE:4120817), complete cds. ACCESSION BC023512 VERSION BC023512.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1588) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1588) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC023512.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: e Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6912293 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1588 /db_xref="H-InvDB:HIT000050803" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4120817" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1588 /gene="CCRN4L" /gene_synonym="CCR4" /gene_synonym="CCR4L" /gene_synonym="MGC4120817" /gene_synonym="NOC" /db_xref="GeneID:25819" CDS 187..690 /gene="CCRN4L" /gene_synonym="CCR4" /gene_synonym="CCR4L" /gene_synonym="MGC4120817" /gene_synonym="NOC" /codon_start=1 /product="CCRN4L protein" /protein_id="AAH23512.1" /db_xref="GeneID:25819" /translation="MFHSPRRLCSALLQRDAPGLRRLPAPGLRRPLSPPAAVPRPASP RLLAAASAASGAARSCSRTVCSMGTGTSRLYSALAKTLNSSAASQHPEYLVSPDPEHL EPIDPKELLEECRAVLHTRPPRFQRDFVDLRTDCPSTHPPIRVMQWNILAQGMLDAFV PLQSSLL" BASE COUNT 353 a 440 c 435 g 360 t ORIGIN 1 agcggtgttg cacctccctc tccggctctg ctgcccggga tttccccaga acctgcgccg 61 cgcgagaagg agcctgggag catccgccca cactgcccgg acagtcggct cgactcggtg 121 ctctcggccc cagccgggct ccgctcctcg ggcgcgcgag gggccgtggt ggcggcggcg 181 cccggcatgt ttcatagtcc gcggcggctc tgctcggccc tgctgcagag ggacgcgccc 241 ggcctgcgcc gcctgcccgc cccagggctg cgccgcccgt tgtccccgcc ggctgctgtt 301 cccaggcccg catccccccg gctgctggcg gcggcctcgg cggcctcggg cgccgcgagg 361 tcgtgttccc gaacagtgtg ttccatggga accggtacaa gcagactcta tagtgctctc 421 gccaagacac tgaacagcag cgctgcctcc cagcacccag agtatttggt gtcacctgac 481 ccagagcatc tggagcccat tgatcctaaa gagcttcttg aggaatgcag ggccgtcctg 541 cacacccgac ctccccggtt ccagagggat tttgtggatc tgaggacaga ttgccctagt 601 acccacccac ctatcagggt tatgcaatgg aacatcctcg cccaaggtat gctggatgct 661 tttgtgcctc tgcagtcaag tttgctgtga ctgcctttct gcttctgcac atccacagtg 721 cactgtttta tgtggaagga agaggtgtgg gcagatggag gtgactgcag cagcatggag 781 agctcctaga agaggttaag acagggaatc atctggtttt cacttttttt tttttttaga 841 aagaaaaaag acactttaat tgttcttgga tagtctacaa acatggaagg tgtaaagaat 901 aaaccacgag ttacttgctt taattgtaaa aaccaagtca ggtgcagtgg ctcacacctg 961 taatcccagc actttgggag gccgaggtgg gtggatcacc tgtggtcagg agttcgagac 1021 cagcctgacc aacatggaga aaccccgttt ctactaaaaa tacaaaatta gccgggtgtg 1081 gtggcgcatg cctgtaatcc cagctactcg ggaggctgag gcaggagaat cgcttgaacc 1141 cagaaagtgg tggttgcagt gagctgagat tgcgccattg cactgttgcc taggctggag 1201 tacagtggcc tgatctcggc tcactgcaag atccgcctcc cgggttcatg gcattctcct 1261 gcctcagcct ccagagcaac tgggacaaca ggcgcccgtc accacgccca gctaattttt 1321 tgtattttta gtagagacgg ggtttcaccg tgttagccag gatggtctcg atctcctgac 1381 cttgaatcac aagagtctta acagggaatg tttcaggaaa caaataggat aagacaatgc 1441 cagaggaagg atagaaacat gggaagtttc tatcatttca ttttctgcgt ttccagcatg 1501 cccttggaaa agactccctt tagtcccttt ttcaattaaa acctatggtg aaaaaggcgt 1561 ttgcactcca aaaaaaaaaa aaaaaaaa //