LOCUS BC023312 2107 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 6,
mRNA (cDNA clone MGC:29856 IMAGE:4996181), complete cds.
ACCESSION BC023312
VERSION BC023312.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2107)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2107)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: k Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377787.
FEATURES Location/Qualifiers
source 1..2107
/db_xref="H-InvDB:HIT000050795"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29856 IMAGE:4996181"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2107
/gene="ST3GAL6"
/gene_synonym="ST3GALVI"
/db_xref="GeneID:10402"
/db_xref="HGNC:HGNC:18080"
/db_xref="MIM:607156"
CDS 468..1463
/gene="ST3GAL6"
/gene_synonym="ST3GALVI"
/codon_start=1
/product="ST3 beta-galactoside alpha-2,3-sialyltransferase
6"
/protein_id="AAH23312.1"
/db_xref="GeneID:10402"
/db_xref="HGNC:HGNC:18080"
/db_xref="MIM:607156"
/translation="MRGYLVAIFLSAVFLYYVLHCILWGTNVYWVAPVEMKRRNKIQP
CLSKPAFASLLRFHQFHPFLCAADFRKIASLYGSDKFDLPYGMRTSAEYFRLALSKLQ
SCDLFDEFDNIPCKKCVVVGNGGVLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRR
TTFRLFYPESVFSDPIHNDPNTTVILTAFKPHDLRWLLELLMGDKINTNGFWKKPALN
LIYKPYQIRILDPFIIRTAAYELLHFPKVFPKNQKPKHPTTGIIAITLAFYICHEVHL
AGFKYNFSDLKSPLHYYGNATMSLMNKNAYHNVTAEQLFLKDIIEKNLVINLTQD"
BASE COUNT 592 a 431 c 463 g 621 t
ORIGIN
1 gagcctgaga ctccgggcag ggctgctccc tcctctgctc ccccgccaga tccgcgggga
61 aggaatcgtg cccgcgccgc ccctggcccg cgccaccttc ctttggtttc tgccggcctc
121 gggcttctgc ggcccgatgt ggcaggcgcc gcgagagagg cagcagccgg ctggagcagc
181 ggcccctcag gtctcggagc ccggtgcgcc tctgcggtcg tcgctcctgg gcctcggcgg
241 gtcactcttg ccggccggct tcgctgcggg tttgcactgc ccggcatttg caagtgagga
301 agcagcacaa ccctgggttt tagataattt ctaacagaga ggccccagca attcagcagg
361 cagcgtcctg agtctttggc agcctggtcc ctctttcgca aattctccac ctttgcgaac
421 agagggtctt taggacacag attcttaaaa gtgcaggtga gccagccatg agagggtatc
481 ttgtggccat attcctgagt gctgtcttcc tctattatgt actgcattgc atattatggg
541 gaacgaatgt ctattgggtg gcacctgtgg aaatgaaacg gagaaataag atccagcctt
601 gtttatcaaa gccagctttt gcctctctgc tgaggtttca tcagtttcac ccttttctgt
661 gtgcggctga ttttagaaag attgcttcct tgtatggtag cgataagttt gatttgccct
721 atgggatgag aacatcagcg gaatattttc gacttgctct ttcaaaactg cagagttgtg
781 atctctttga tgagtttgac aacataccct gtaaaaagtg tgtggtggtt ggtaatggag
841 gagttttgaa gaataagaca ttaggagaaa aaatcgactc ctatgatgta ataataagaa
901 tgaataatgg tcctgtttta ggacatgaag aagaagttgg gagaaggaca accttccgac
961 ttttttatcc agaatctgtt ttttcagatc ctattcacaa tgaccctaat acgacagtga
1021 ttctcactgc ttttaagcca catgatttaa ggtggctgtt ggaattgttg atgggtgaca
1081 aaataaacac taatggtttt tggaagaaac cagccttaaa cctgatttat aaaccttatc
1141 aaatccgaat attagatcct ttcattatca gaacagcagc ttatgaactg cttcattttc
1201 caaaagtgtt tcccaaaaat cagaaaccta aacacccaac aacaggaatt attgccatca
1261 cattggcgtt ttacatatgt cacgaagttc acctagctgg ttttaaatac aacttttctg
1321 acctcaagag tcctttgcac tactatggga atgccaccat gtctttgatg aataagaacg
1381 cgtatcacaa tgtgactgca gagcagctct ttttgaagga cattatagaa aaaaacctcg
1441 taatcaactt gactcaagat tgactctaca gactcagaag atgatgctaa cagtgttagt
1501 tttatttttg tactgcaatt tttagtttaa aatatgttgg atgcactcgt caaataatta
1561 tgtatactgt ctgttgctgc ctggtgattc ataaccacca gcttaatttc tgtgaatact
1621 gtatatttaa cttatgaaaa ccaagaaatg taaagataac aggaaaataa gttttgattg
1681 caatgttttt aaaataagct agttttctga ggtgttttca cacgtctttt tatagttact
1741 tcatcttaga tttttgaagg gatatgactt cctactaagg atttagttta ccacaacaat
1801 tctgactaca ataagacatt ttgaggagga tatttggcta ctgtaaacat ggctggtgga
1861 aaatcacgat tgtggcttga tgtggcaagc cgaaaccact tggctctgga aatctaagtt
1921 catactggtt taattaagct ctctcctgac aacccccaga attaaatgaa ccatgattgt
1981 gaagagtaat ttggtacaat gaaggcagtg tttgttttta agttaaagga aatgggctaa
2041 acataaagtt cttattagat aagtaaataa ctaaagaaag aatacaatta ctaaaaaaaa
2101 aaaaaaa
//