LOCUS BC023215 3063 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens solute carrier family 8 (sodium/calcium exchanger), member 3, mRNA (cDNA clone IMAGE:4932133), with apparent retained intron. ACCESSION BC023215 VERSION BC023215.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3063) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3063) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: g Column: 16 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..3063 /db_xref="H-InvDB:HIT000090739" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4932133" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 851 a 738 c 697 g 777 t ORIGIN 1 ggtggacaaa ctgatcaaga agacaaacct ggccttggtt gtggggaccc attcctggag 61 ggaccagttc atggaggcca tcaccgtcag tgcagcaggg gatgaggatg aggatgaatc 121 cggggaggag aggctgccct cctgctttga ctacgtcatg cacttcctga ctgtcttctg 181 gaaggtgctg tttgcctgtg tgccccccac agagtactgc cacggctggg cctgcttcgc 241 cgtctccatc ctcatcattg gcatgctcac cgccatcatt ggggacctgg cctcgcactt 301 cggctgcacc attggtctca aagattcagt cacagctgtt gttttcgtgg catttggcac 361 ctctgtccca ggtgagagtg agaggtgctt gaatttgcaa agaggatttt acctggttca 421 aatgacccct ggactccatc tcattatctt ccacaccatc tcagatctga acttaacaga 481 gcctctgccc ttaaagtgca caaaagtcaa tcaaagagat gaataatgac attagtaatg 541 acagctaata tttcttgagc actttcaatg tgacagacac catgtgtgtt cagcaattta 601 cacatttaca ttttccccct gtaatgtttc ccaaagccct attaaatagg gtaagttatt 661 atccccactt cacagacaaa gaaactgagg cccacagagg ttaagctaca tgcccaagta 721 agtggtccaa tttcttaacc tccacattat gtgagtagac cacaaacagt gaaattaaaa 781 gaatgtagat attgttctcc ttctatttac ctctggcgat ctctgagagg ttaaagatta 841 gccagctcaa agatatcaaa ggagaaatgc ccacatacat tcttggcctc ctctacttgg 901 aaggacactg tgagtacaaa gtatctccta gcaggacagc caaaggaagt tccacagctt 961 ttatcttttt ataggatgaa ttacatactc tttctttttc ttaggaacac tcagagacaa 1021 acagaaagga gcggacattc ctttactcat tgaacaaata tttactgagc acctattatg 1081 cctgttacag tattgtgcta gtttttggga ctatagtgaa aggcaagata cacatgcttc 1141 cttctccacg tggagtttat aatctactga aggaggcaac tctcaactac tgtaattaaa 1201 gttatcttgt taaatcctag gaagaaaaag aaaaggtact gcatacggaa ggaagttggg 1261 cctgaatgta ggagttagca ggtagacagg ggctgcacta gcccaggttc tttacttaat 1321 tcagttaggg gctttggggc ctctgaactc tgaacttctg ccagggagct ggcatcccag 1381 ttgccccaga aagaaacaga gcacatcctc ctgcagggaa gttaggctga atctcatcag 1441 acaggacttt tctggctggg ccaagggaaa tctttcctgt accaagcaaa catatccttc 1501 aagagagtag ctgaattcac atcaaattct aggaaaacct ctttccaaaa ccccagcgca 1561 ggccagcggt attatttgtc cattagtgat gcaagagatt tagctatcgt ggaaatgcat 1621 cagaaggttg gaaattagat ggatgatccc aggaaggcct gtggatgaga tgccctgtga 1681 tctctgttct ccaagccttg ggggacctga actatcagag gggagggagg aaatatgggg 1741 gaaagcatag aggtgggaag aaatatcaga ggatcagaag caaaaaacaa caataacaac 1801 agaaacaaaa acaaacaaac aaacaaaaaa acaaggccat aggcaagaaa gggtaagagg 1861 ttttctctgg gagatctaaa aaaaatggca ataatgaggt aagccaggca gatacctttg 1921 ggcatctcca agtccttgca attggccaag acaacagcta acaacatttg aggctttaag 1981 aaggttaccc tgtgatccac tcatctgatt tagtggcttt ggctgaagct ctttggatat 2041 agttgaaggt atggaaaggg tccttacatg aggactttag ggtcaagtct cttgctaaca 2101 tcctatgtga ccttgggtaa attctttgac ccttattttt cttacctgta aaataaaaga 2161 attgggctag atgtctctga cagtcctccc tgtatctaca atctgtgcca agatctaaag 2221 tcaaacaccc tgcaaggccc tgtgatacat atataaacca caaagacaga gccccgtctt 2281 ccttgagtcc acagttcacc ctgcatgtcc ccatcatggt tccccaacat gtcctctgtc 2341 cccaaaatcc agcacctcac ccagtgctca atcagtaggc attgctcaat aactgttggt 2401 ggttcgtgaa taaatgcccc atatgacagt taaaatcagg catctactcc aagcagcttc 2461 ccagggtgtc aaggttccct ggggagatat tatgggatgg caaacttccc ttactgaaaa 2521 agtagtcaaa ggagaacaat aagcccactc agtaaatatc agaactggaa agcccttcag 2581 aatctttcag atcactgcag atgaggaatg ggaagcccag actagggatg tgacctaccc 2641 agggccacac ggcttgcttg cggcagaact aggagttagg agtggccccc tagcccttgt 2701 ctctcattcc tgggttcagc ccaccagctc aagctgcttt ttgggcatac tggaagacaa 2761 gccctgcaca ccttagcctc ctaccagttc ccatgtgtct ttgtcctttt ccagatacgt 2821 ttgccagcaa agctgctgcc ctccaggatg tatatgcaga cgcctccatt ggcaacgtga 2881 cgggcagcaa cgccgtcaat gtcttcctgg gcatcggcct ggcctggtcc gtggccgcca 2941 tctactgggc tctgcaggga caggagttcc acgtgtcggc cggcacactg gccttctccg 3001 tcaccctctt caccatcttt gcatttgtct gcatcagcgt gctcttgtac cgaaggcggc 3061 cgc //