LOCUS BC023152 3185 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens glycogenin 2, mRNA (cDNA clone MGC:9153
IMAGE:3923041), complete cds.
ACCESSION BC023152
VERSION BC023152.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3185)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3185)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453673.
FEATURES Location/Qualifiers
source 1..3185
/db_xref="H-InvDB:HIT000039700"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9153 IMAGE:3923041"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3185
/gene="GYG2"
/gene_synonym="GN-2"
/gene_synonym="GN2"
/db_xref="GeneID:8908"
/db_xref="HGNC:HGNC:4700"
/db_xref="MIM:300198"
CDS 150..1562
/gene="GYG2"
/gene_synonym="GN-2"
/gene_synonym="GN2"
/codon_start=1
/product="glycogenin 2"
/protein_id="AAH23152.1"
/db_xref="GeneID:8908"
/db_xref="HGNC:HGNC:4700"
/db_xref="MIM:300198"
/translation="MSVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQ
VSSLLRVILSKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVF
LDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGS
FDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFKQFGSSAKVVHFLGS
MKPWNYKYNPQSGSVLEQGSVSSSQHQAAFLHLWWTVYQNNVLPLYKSVQAGEARASP
GHTLCRSDVGGPCADSASGVGEPCENSTPSAGVPCANSPLGSNQPAQGLPEPTQIVDE
TLSLPEGRRSEDMIACPETETPAVITCDPLSQPSPQPADFTETETILQPANKVESVSS
EETFEPSQELPAEALRDPSLQDALEVDLAVSVSQISIEEKVKELSPEEERRKWEEGRI
DYMGKDAFARIQEKLDRFLQ"
BASE COUNT 760 a 791 c 850 g 784 t
ORIGIN
1 ggcagccaga gcgcggaaga ggcctggaaa tccacgcgga ttcccggaga cggcgcctct
61 gctctgcggg ttcgtggcga ggaagtccac ccactgctcc cgggcgcagg tctgcaggtc
121 cgcgcccact gcccgcggcg ccactgacca tgtcggtgac tgatcaggct tttgtcacac
181 tagccaccaa tgacatctac tgccagggcg ccctggtcct ggggcagtca ctgaggagac
241 acaggctgac gaggaagctg gtggtgttga tcactcctca ggtgtccagc ctgctcaggg
301 tcatcctctc gaaggtgttc gatgaagtca ttgaagtgaa tctaatcgat agtgccgact
361 acatccacct ggcctttctg aagagacctg agctcgggct caccctcacc aagcttcact
421 gttggactct cactcactac agcaagtgtg tcttcctgga tgcagacact ctggtgctgt
481 ccaatgtcga tgagctgttt gacaggggag agttttctgc ggccccggac cccggatggc
541 cggattgctt caatagcggg gtgtttgtct tccagccttc tctccacacg cataaactcc
601 tgctacagca cgccatggaa cacggcagct ttgacggggc agaccaaggc ttactgaata
661 gtttcttcag gaactggtcg accacagaca tccacaagca cctgccgttc atctataact
721 tgagtagtaa cacgatgtac acttacagcc ctgccttcaa gcaattcggt tccagtgcaa
781 aggtcgtcca ctttttgggg tccatgaaac cttggaacta caagtacaat ccacagagtg
841 gctcggtgtt ggagcaaggc tcagtgtcca gcagccagca ccaggcggca ttccttcatc
901 tctggtggac ggtctaccag aacaacgtgc tgccccttta taaaagcgtc caagcggggg
961 aagcacgcgc gtctcctggt cacacacttt gccgcagtga tgtggggggg ccgtgtgcgg
1021 attcagcctc tggtgttgga gagccgtgtg aaaattcaac acccagtgcg ggcgtgccgt
1081 gtgcaaattc accactgggt tctaaccagc ctgctcaggg ccttccggag ccgacccaga
1141 tagtggatga gaccctgtcc ctacctgaag gacgccgttc agaagatatg atagcttgtc
1201 ctgaaactga gactcctgcc gtgataacgt gtgacccact gtcccagcct tcccctcagc
1261 ctgcagactt cacagagact gaaaccatct tgcagccagc aaataaagtc gaaagtgtct
1321 catccgagga aaccttcgaa ccaagccagg aactccctgc tgaggctctc agggacccca
1381 gtctgcagga tgcactggag gtcgacctgg ccgtctctgt ttcccagatc tccatcgaag
1441 agaaggtgaa ggaattgagc cccgaggaag agaggaggaa gtgggaggaa ggccgtatcg
1501 actacatggg gaaggacgcg tttgctcgca tccaggagaa gctggaccgg ttcctgcagt
1561 aatccggcag ctggtgggcg ttgtgtgtag ttagacaatg tcctgttggg tggtcctgtt
1621 gcgtggagat ctcctctggt cctttcaaag ggaaacgctg ttgaaccttg tgcctctatt
1681 tatgcttaat ccatttgagt gcctcacaca aaaaacgtag agtatagaaa tccaccttaa
1741 agcccctcgc cccaacttct ccaccaacgc cttctgggct ttcttcagag gtcacttcta
1801 cccttgaagc tgtcggcaaa agcgagcagt aataacattc tagtagactc tcgatggtgg
1861 tctccgctct tgcccgaagg acctctgaag tacgctggag ctgtgttgta caggtgctgt
1921 gagacctacc ctattcagaa ttaaacctca ctgcaaattt cctcccatca cgaagctaac
1981 aacactaata tacgtattta gcacctctga ggctttgcca tggagaccca tttctgtagg
2041 gctaaggaaa catttagacg tggtgactga ctttcatttg gacttggcga agtgtatctg
2101 agaaacacct cggctgtggt ctctctgctt taaatcctaa caggacttcc tagagcgttg
2161 acagaaattc tactcgtgga cgttgggaag aaagattgta ggtggcttgg ggaatgtggg
2221 tggcttagag gatctaaacc gattcacttc ctggttgaga agcaacgagg gcttgctcta
2281 aatcgtttag aggataacag gatctagaga tgctctctgc ttgacaacaa aagtcagggt
2341 gcagtcggtc cacccttgac tgctcttggc ttggtctcta ccctcactac ctcagttctc
2401 aataacttag tgaatcactg ccctcctcaa agccatttcc actcagctct ttccagagaa
2461 ttctcagttt tatgagacgg gaaactttat ttcacgagaa agcctcattg tcagaagtat
2521 cttcattcaa tgggcacaat atgctgtgta tctcaccagg tagctgtcag gggccaccga
2581 gagtgtcgtt aaaaatgggc atcgttgtaa taaaggagga aagtgcgact tttgaaatgt
2641 ttggaaggtt tatttctcat gcacattcca gggaaaagca gagagtaaat tagagacggg
2701 ataggaaggc cgtgggagaa ctcgatccta gcctgtgtca gctggatgtg tttacgtgga
2761 gaggcgtggc cactttttag gtcacctgaa gcagtttagc ctttggatag aggaacctgc
2821 ctgaatttat ggcattagtg gtggcatttt tttgtgtaca agatgtgggt gatggagggg
2881 ctgtttcttt ttccgtgtgg gtggttaata atcgtcagtc tcggagggcg atgctcgtag
2941 gatatttcag gtgagtcagg gttggatggt catcggcttt cagagggaga ccacgggaat
3001 gttcagggaa acaatgtcag cttctctgag gaccagaatt catgttcacg ggcagtgatg
3061 agttggctta tggagtgagt ccagtctgga attccgccgt gcattctagc ctgtatcatc
3121 tcatttggac aaatgctggc acgttgaaat taaaatgtta aaaaacagca aaaaaaaaaa
3181 aaaaa
//