LOCUS BC022873 1226 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1), mRNA (cDNA clone IMAGE:4102924), partial cds. ACCESSION BC022873 VERSION BC022873.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1226) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1226) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 32 Row: e Column: 8. FEATURES Location/Qualifiers source 1..1226 /db_xref="H-InvDB:HIT000090700" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4102924" /tissue_type="Brain, glioblastoma" /clone_lib="NIH_MGC_57" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..>1226 /gene="PPFIBP1" /gene_synonym="hSGT2" /gene_synonym="hSgt2p" /gene_synonym="L2" /db_xref="GeneID:8496" /db_xref="HGNC:HGNC:9249" /db_xref="MIM:603141" CDS 349..>1226 /gene="PPFIBP1" /gene_synonym="hSGT2" /gene_synonym="hSgt2p" /gene_synonym="L2" /codon_start=1 /product="PPFIBP1 protein" /protein_id="AAH22873.1" /db_xref="GeneID:8496" /db_xref="HGNC:HGNC:9249" /db_xref="MIM:603141" /translation="MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMG SLRALHLVEDLRGLLEMMETDEKEGLRCQIPDSTAETLVEWLQSQMTNGHLPGNGDVY QERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELL SRTSLETQKLDLMAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMD SERLQYEKKLKSTKDELASLKEQLEEKESEVKRLQEKLVCKMKGEGVEIVDRDENFKK KLKEKNIEVQKKKKKK" BASE COUNT 412 a 195 c 344 g 275 t ORIGIN 1 ggggagtggg agggggaggt acctggaact gggagtgatg tcagctccca gctcggtgcc 61 tgcccggatt cctgacatgg tgtagtgcag gcagggtggg gaaaggacgg ggaaggactc 121 gtgtgctgcg agctggcggc cgggccggag tgctggggct ttgaactccg agaggaggtg 181 gaccagaact tttggaacta gtgccggcgg ctctccaccc cccagtataa aagaacgtgt 241 ggatcacttt gctgagtaca tccaagattt gaagaactga aataaatcag ctttaaacct 301 gctttttaaa aatatctggg ttggaatttg cccctgacaa ataataaaat gatgagtgat 361 gcaagtgaca tgttggctgc agcgttggag cagatggatg gtatcatagc aggttctaag 421 gctctggaat attccaatgg gatttttgat tgccaatctc ccacctctcc attcatggga 481 agtttgcgag ctctgcacct tgtggaagac ctgcgtggat tgttagagat gatggaaaca 541 gatgagaaag aaggcttgag atgccagatc ccagattcaa cagcagaaac gcttgttgaa 601 tggcttcaga gtcaaatgac aaatggacac ctaccaggga acggagatgt gtatcaagaa 661 aggctggcac gtttagaaaa tgataaagaa tccctcgttc ttcaggtaag tgtgttaaca 721 gaccaggtgg aggctcaggg agagaagatt cgagatttgg agttttgtct tgaagagcac 781 agagagaagt tgaatgccac agaagaaatg ctgcagcagg agcttctaag taggacatcc 841 ttagaaactc agaagttgga tctgatggct gaaatatcta acttgaagtt gaaactgaca 901 gctgtagaga aggacagatt ggattatgaa gataagttca gagacacaga ggggctgatt 961 caggagatca atgatttgag gttaaaagtt agtgaaatgg acagtgagag acttcagtat 1021 gaaaaaaagc ttaaatcaac caaagatgaa ctggcatctt taaaagaaca actagaagaa 1081 aaggaatctg aagtaaaaag gctacaagaa aaattggttt gcaagatgaa aggagaaggg 1141 gttgaaattg ttgatagaga tgaaaatttt aaaaagaagc tcaaagaaaa aaacatcgaa 1201 gtacaaaaaa aaaaaaaaaa aaaaaa //