LOCUS BC022843 1014 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens solute carrier organic anion transporter family,
member 1B3, mRNA (cDNA clone IMAGE:4734792), partial cds.
ACCESSION BC022843
VERSION BC022843.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1014)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1014)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57222266.
FEATURES Location/Qualifiers
source 1..1014
/db_xref="H-InvDB:HIT000090694"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4734792"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1014
/gene="SLCO1B3"
/gene_synonym="LST-3TM13"
/gene_synonym="LST3"
/gene_synonym="OATP1B3"
/gene_synonym="OATP8"
/db_xref="GeneID:28234"
/db_xref="HGNC:HGNC:10961"
/db_xref="MIM:605495"
CDS 126..>1014
/gene="SLCO1B3"
/gene_synonym="LST-3TM13"
/gene_synonym="LST3"
/gene_synonym="OATP1B3"
/gene_synonym="OATP8"
/codon_start=1
/product="SLCO1B3 protein"
/protein_id="AAH22843.1"
/db_xref="GeneID:28234"
/db_xref="HGNC:HGNC:10961"
/db_xref="MIM:605495"
/translation="MDQHQHLNKTAESASSEKKKTRRCNGFKMFLAALSFSYIAKALG
GIIMKISITQIERRFDISSSLAGLIDGSFEIGNLLVIVFVSYFGSKLHRPKLIGIGCL
LMGTGSILTSLPHFFMGYYRYSKETHINPSENSTSSLSTCLINQTLSFNGTSPEIVEK
DCVKESGSHMWIYVFMGNMLRGIGETPIVPLGISYIDDFAKEGHSSLYLGSLNAIGMI
GPVIGFALGSLFAKMYVDIGYVDLSTIRITPKDSRWVGAWWLGFLVSGLFSIISSIPF
FFLPKNPNKPQKKKKKKKKK"
BASE COUNT 337 a 168 c 191 g 318 t
ORIGIN
1 agactttaac atcagaaaaa ggatggactt gttgcagttg ctgtagcatt caaagtcaag
61 gtgatcattt caaaccaagc atcagcaaca attaaaaata ttcacttggt atctgtagtt
121 taataatgga ccaacatcaa catttgaata aaacagcaga gtcagcatct tcagagaaaa
181 agaaaacaag acgctgcaat ggattcaaga tgttcttggc agccctgtca ttcagctata
241 ttgctaaagc actaggtgga atcattatga aaatttccat cactcaaata gaaaggagat
301 ttgacatatc ctcttctctt gctggtttaa ttgatggaag ctttgaaatt ggaaatttgc
361 ttgtgattgt atttgtaagt tactttggat ctaaactaca cagaccgaag ttaattggaa
421 ttggttgtct ccttatggga actggaagta ttttgacatc tttaccacat ttcttcatgg
481 gatattatag gtattctaaa gaaacccata ttaatccatc agaaaattca acatcaagtt
541 tatcaacctg tttaattaat caaaccttat cattcaatgg aacatcacct gagatagtag
601 aaaaagattg tgtaaaggaa tctgggtcac acatgtggat ctatgtcttc atggggaata
661 tgcttcgtgg cataggggaa acccccatag taccattggg gatttcatac attgatgatt
721 ttgcaaaaga aggacattct tccttgtatt taggtagttt gaatgcaata ggaatgattg
781 gtccagtcat tggctttgca ctgggatctc tgtttgctaa aatgtacgtg gatattggat
841 atgtagatct gagcactatc agaataactc ctaaggactc tcgttgggtt ggagcttggt
901 ggcttggttt ccttgtgtct ggactatttt ccattatttc ttccatacca ttttttttct
961 tgccgaaaaa tccaaataaa ccacaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//