LOCUS BC022550 2007 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens transmembrane protein 188, mRNA (cDNA clone
IMAGE:4818602), complete cds.
ACCESSION BC022550
VERSION BC022550.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2007)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2007)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: o Column: 10
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2007
/db_xref="H-InvDB:HIT000050774"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4818602"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2007
/gene="TMEM188"
/db_xref="GeneID:255919"
/db_xref="HGNC:HGNC:26759"
CDS 62..205
/gene="TMEM188"
/codon_start=1
/product="TMEM188 protein"
/protein_id="AAH22550.1"
/db_xref="GeneID:255919"
/db_xref="HGNC:HGNC:26759"
/translation="MNSLEQAEDLKAFERRLTEYIHCLQPATGRWRSVLLHIIMESPI
FHH"
BASE COUNT 574 a 369 c 387 g 677 t
ORIGIN
1 ggtggccgcg gaagctgcga tgcggacagg gcagcggcgg tgacccgagc tgccgcccga
61 catgaactcg ctggagcagg cggaagatct caaggctttt gagaggagac ttactgaata
121 tattcattgt ttgcaacctg ctactggacg ctggagaagt gtccttcttc acatcattat
181 ggaatcaccc atttttcacc attagctgta tcactctaat aggcttgttc tttgctggaa
241 tacacaagag agtagttgca ccatcaatta tagctgctcg atgtcgaacg gtattagcag
301 aatacaatat gtcttgtgat gatacaggaa aactaatttt gaaacctagg cctcatgttc
361 aatgacaatc ttcactcatt gttatgggac ttaaaatagc ctttcttcga ataagtgata
421 cagcaaaaag ccataaagga ttccttttgc ggttggatat gtaaaggtca tagcagcaac
481 tgacaagaag tgtgcaatat ttacctggat tatcttgatg atggtgactc attatcagtg
541 ctttggtact tttgattacc tgtgtttcag tattagtgtc actttagtac ttcagatcct
601 gcaaatattt ttgcagatga agtatgtatg tatgttacta agttaaactt agaaacagaa
661 cctcattcag tttttataat gtatttttgc aaactactgt aaatagcaaa tcaatgccaa
721 tgttaaacaa agaggaaaac gttgtgtgga ctttgttctc ttgcaccggt atttcaggaa
781 catctgcttg ccatccccac agctctttaa aactggctat tatgtgtgcc tttcattctt
841 acatttctaa tcatactgca ggaaaaacat tggattcagc ttagactgag gaaaactctc
901 cattatgttg taagaaatta tagatgtttt gagagacact ttttgttaaa ccagatattg
961 aactccagca actattgtgg ttatattttt agttcattgt tctcatttaa tgctaaatat
1021 cctttatatt gctttaataa ttttcttttt tttttttttt ttttagacgg agtctcgctc
1081 tgttgccagg ctggagggca gtggcacgat cttggctttc tgcaacctct gcctcccagg
1141 ttcaagcgat tctcctgctt cagccttccg agtagctggg actacaggcg catgccacca
1201 tgcccagcta atttttttgt atttttagta gagacggggt ttcaccacgt tggccaggat
1261 ggtttcgatc tcctgacctc gtgatcctcc tgcctcatcc tcccaaaatg ctgggattac
1321 aggcataagc caccgtgcct ggcctcttta ataattttta aaatacccta aaggcttgtg
1381 aatatacaag tctactgata aattatgtat tgtctgggaa tttgatagtc attgttttag
1441 ataactggat tttacgctgt ggtagacagg ctgtgacact agtgttgcac aggtgtaatt
1501 ggtcatccta tgccttcacc agaataactt gggagtggtg ccagaaacta gagtctacaa
1561 ttctcactgt ttagagagtg ttaatgacat actgtgtatg cataatagcc gcatgtacta
1621 taatagccct taaaattaaa ctattgggat tgctgtaaat attttaaagt actggaggtg
1681 ccttttacct gtttattaga ttttgaaaag gtttaaatta tttcatgagc aatcttttaa
1741 atttcattta acataaagct ggaaattcaa taacaggata aaaaagcttt ttaacaaggc
1801 tgccatttaa cttaaatgtg ttcatcttag ctttcacttg tataaaattt gattctttga
1861 actgcagcaa taaaaccctc agctcctaag aagtcttaag agggtattct atatattctg
1921 ctttgtttta ttttctgtaa attttgtagg taaatatgtg cattaaaaat aaatacttta
1981 tatataactc gaaaaaaaaa aaaaaaa
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