LOCUS BC022548 3254 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens RasGEF domain family, member 1A, mRNA (cDNA clone
MGC:26821 IMAGE:4814750), complete cds.
ACCESSION BC022548
VERSION BC022548.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3254)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3254)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: l Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21687176.
FEATURES Location/Qualifiers
source 1..3254
/db_xref="H-InvDB:HIT000039622"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26821 IMAGE:4814750"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3254
/gene="RASGEF1A"
/gene_synonym="CG4853"
/gene_synonym="FLJ37817"
/db_xref="GeneID:221002"
/db_xref="HGNC:HGNC:24246"
CDS 82..1527
/gene="RASGEF1A"
/gene_synonym="CG4853"
/gene_synonym="FLJ37817"
/codon_start=1
/product="RasGEF domain family, member 1A"
/protein_id="AAH22548.2"
/db_xref="GeneID:221002"
/db_xref="HGNC:HGNC:24246"
/translation="MPQTSVVFSSILGPSCSGQVQPGMGERGGGAGGGSGDLIFQDGH
LISGSLEALMEHLVPTVDYYPDRTYIFTFLLSSRVFMPPHDLLARVGQICVEQKQQLE
AGPEKAKLKSFSAKIVQLLKEWTEAFPYDFQDEKAMAELKAITHRVTQCDEENGTVKK
AIAQMTQSLLLSLAARSQLQELREKLRPPAVDKGPILKTKPPAAQKDILGVCCDPLVL
AQQLTHIELDRVSSIYPEDLMQIVSHMDSLDNHRCRGDLTKTYSLEAYDNWFNCLSML
VATEVCRVVKKKHRTRMLEFFIDVARECFNIGNFNSMMAIISGMNLSPVARLKKTWSK
VKTAKFDVLEHHMDPSSNFCNYRTALQGATQRSQMANSSREKIVIPVFNLFVKDIYFL
HKIHTNHLPNGHINFKKFWEISRQIHEFMTWTQVECPFEKDKKIQSYLLTAPIYSEEA
LFVASFESEGPENHVEKDSWKTLRTTLLNRA"
BASE COUNT 781 a 824 c 895 g 754 t
ORIGIN
1 ggcggcggcc gcgcgctgct cggggcccga ctgcggcgcg agggcggcgc gggagcgacg
61 ctggcccgga ccgaggaaac tatgccgcag acgtccgttg tcttctccag catccttggg
121 cccagctgta gcggacaggt gcagcctggc atgggggagc gtggaggcgg ggccggtggc
181 ggctccgggg acctcatctt ccaagatgga cacctcatct ctgggtccct ggaggccctg
241 atggagcacc ttgttcccac ggtggactat taccccgata ggacgtacat cttcaccttt
301 ctcctgagct cccgggtctt tatgccccct catgacctgc tggcccgcgt ggggcagatc
361 tgcgtggagc agaagcagca gctggaagcc gggcctgaaa aggccaagct gaagtctttc
421 tcagccaaga tcgtgcagct cctgaaggag tggaccgagg ccttccccta tgacttccag
481 gatgagaagg ccatggccga gctgaaagcc atcacacacc gtgtcaccca gtgtgatgag
541 gagaatggca cagtgaagaa ggccattgcc cagatgacac agagcctgtt gctgtccttg
601 gctgcccgga gccagctcca ggaactgcga gagaagctcc ggccaccggc tgtagacaag
661 gggcccatcc tcaagaccaa gccaccagcc gcccagaagg acatcctggg cgtgtgctgc
721 gaccccctgg tgctggccca gcagctgact cacattgagc tggacagggt cagcagcatt
781 taccctgagg acttgatgca gatcgtcagc cacatggact cattggacaa ccacaggtgc
841 cgaggggacc tgaccaagac ctacagcctg gaggcctatg acaactggtt caactgcctg
901 agcatgctgg tggccactga ggtgtgccgg gtggtgaaga agaaacaccg gacccgcatg
961 ttggagttct tcattgatgt ggcccgggag tgcttcaaca tcgggaactt caactccatg
1021 atggccatca tctctggcat gaacctcagt cctgtggcaa ggctgaagaa aacttggtcc
1081 aaggtcaaga cagccaagtt tgatgtcttg gagcatcaca tggacccgtc cagcaacttc
1141 tgcaactacc gtacagccct gcagggggcc acgcagaggt cccagatggc caacagcagc
1201 cgtgaaaaga tcgtcatccc tgtgttcaac ctcttcgtta aggacatcta cttcctgcac
1261 aaaatccata ccaaccacct gcccaacggg cacattaact ttaagaaatt ctgggagatc
1321 tccagacaga tccatgagtt catgacatgg acacaggtag agtgtccttt cgagaaggac
1381 aagaagattc agagttacct gctcacggcg cccatctaca gcgaggaagc tctcttcgtc
1441 gcctcctttg aaagtgaggg tcccgagaac cacgtggaaa aagacagctg gaagaccctc
1501 aggaccaccc ttctgaacag agcctgaggc ggatgcagcc cgcgacgcca gaggaagcac
1561 gtgcactaac tgggtttaaa ttttgactga tgtgggttga gatgaggagg cctcactggt
1621 tggggtccat tttgtatata acttttatga gaaaaaaatg gtaattattt cacgcatcaa
1681 cctttggcac ttacaaagtt ttttttgttt attttaaata acagggcagg gccctgcttt
1741 ggggaggggg aggggagagt atcatgggag atggtatcca tgataacatc ttattctaat
1801 gaaatgtaga tttttatttt ctacttttga ttattgacat cttatgaaaa aaatatttta
1861 aaaaacccag ccaaaaccaa cgtgagccct gcctgctcgg acgcctttcc agccagtgtc
1921 tctgacgtcg gggttagtgc cttagagggt actggggtct ggtcttcctg ctctgtggtt
1981 tgggctgcgg tgagtcccac tccacctggg cgcctgccct caggagcctg ggctgcgagg
2041 ctccatagga gggctggtgg ctgggaggtc gcgtccgcac acttctggaa gtgagccttt
2101 gagtacgggc tgtccaaagt ttacattttc attttccttt cagggatttg cggggtcagg
2161 gaggggcagg gggcacctgg cagcatattt tctgtgacaa tgtgtccagc aaatcattct
2221 tcaactacat tttagaaagg aggaaatcta aaataaggta agggagggaa gcatggagtt
2281 gtcagttttc tgggctgtga ctgaaagaca cactgagctg tgatgaagaa aaatacatgg
2341 ccgactccag ggtggtgaca tttagagcta gtcttgaaac ctatcatcta cagaggggag
2401 ggcagccaac agccctcttc ccacctgggt aggcagcgcc ctaattggaa ttggaaacag
2461 aaaattcgcc aggccatact gctggagccc attcagataa aactgcccaa atactgagag
2521 gtgttttcta cacccagcta gaggagcaca ctccattttc ccatgtctga cttcgtggtg
2581 tgagccctgg gccctactga ccatggcgca ggacagctgt ccttcagaaa gcacacggtc
2641 aatccacgtg gaccgtctcc ctcgcaggaa ctccgcatcc ttgtccctct ctgcattccc
2701 agtttccgca ggagccttga tcaatgggga agcctgggtg aggatgggcc aggtcccaat
2761 tcccaaagct cctggaagag cctgaagaca ttgggaaagg ctgggcctgg ggaggaggca
2821 gccctgggcc cgttgcccat gcctctggtc ctgggtggag caggaatagt tccactgtat
2881 tgtcacagtg tgtttgcact ttctgaggtt ctagctagta cagattgtat attgatagta
2941 catattgctt tgtttatgtc tttgagatga gaaaggctta aaacttgaga atatatattt
3001 ggaatacagc cttagaacgg tttctgtaca catccacgtg cacttcacgg gtgatcagtt
3061 ctagtaccta cttgaaacag tgtctgtctg ctactttatt ttcccaattt gatacatacc
3121 ctgatttgat gttttggtat ttgagatgaa ctctgagtat gaagctgtac cataatgcag
3181 ggcgtcagtt ttggtgtgac tggacatact tgcttcaata aaagaataca tcactcccaa
3241 aaaaaaaaaa aaaa
//