LOCUS BC022541 1934 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens neurexophilin 3, mRNA (cDNA clone MGC:26801
IMAGE:4794968), complete cds.
ACCESSION BC022541
VERSION BC022541.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1934)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1934)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: d Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27754211.
FEATURES Location/Qualifiers
source 1..1934
/db_xref="H-InvDB:HIT000039616"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26801 IMAGE:4794968"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1934
/gene="NXPH3"
/gene_synonym="NPH3"
/db_xref="GeneID:11248"
/db_xref="HGNC:HGNC:8077"
/db_xref="MIM:604636"
CDS 104..862
/gene="NXPH3"
/gene_synonym="NPH3"
/codon_start=1
/product="neurexophilin 3"
/protein_id="AAH22541.1"
/db_xref="GeneID:11248"
/db_xref="HGNC:HGNC:8077"
/db_xref="MIM:604636"
/translation="MQLTRCCFVFLVQGSLYLVICGQDDGPPGSEDPERDDHEGQPRP
RVPRKRGHISPKSRPMANSTLLGLLAPPGEAWGILGQPPNRPNHSPPPSAKVKKIFGW
GDFYSNIKTVALNLLVTGKIVDHGNGTFSVHFQHNATGQGNISISLVPPSKAVEFHQE
QQIFIEAKASKIFNCRMGWEKVERGRRTSLCTHDPAKICSRDHAQSSATWSCSQPFKV
VCVYIAFYSTDYRLVQKVCPDYNYHSDTPYYPSG"
BASE COUNT 415 a 562 c 609 g 348 t
ORIGIN
1 actggagcat gggacggcgc gcctgaagga gcaggaaggg gaaggaggcc tgggaccccg
61 aaaagagaag gggagagcga ggggacgaga gcggaggagg aagatgcaac tgactcgctg
121 ctgcttcgtg ttcctggtgc agggtagcct ctatctggtc atctgtggcc aggatgatgg
181 tcctcccggc tcagaggacc ctgagcgtga tgaccacgag ggccagcccc ggccccgggt
241 gcctcggaag cggggccaca tctcacctaa gtcacgcccc atggccaatt ccactctcct
301 agggctgctg gccccgcctg gggaggcttg gggcattctt gggcagcccc ccaaccgccc
361 gaaccacagc cccccaccct cagccaaggt gaagaaaatc tttggctggg gcgacttcta
421 ctccaacatc aagacggtgg ccctgaacct gctcgtcaca gggaagattg tggaccatgg
481 caatgggacc ttcagcgtcc acttccaaca caatgccaca ggccagggaa acatctccat
541 cagcctcgtg ccccccagta aagctgtaga gttccaccag gaacagcaga tcttcatcga
601 agccaaggcc tccaaaatct tcaactgccg gatggggtgg gagaaggtag aacggggccg
661 ccggacctcg ctttgcaccc acgacccagc caagatctgc tcccgagacc acgctcagag
721 ctcagccacc tggagctgct cccagccctt caaagtcgtc tgtgtctaca tcgccttcta
781 cagcacggac tatcggctgg tccagaaggt gtgcccagat tacaactacc atagtgatac
841 cccctactac ccatctgggt gacccggggc aggccacaga ggccaggcca gggctggaag
901 gacaggcctg cccatgcagg agaccatctg gacaccgggc agggaagggg ttgggcctca
961 ggcagggagg ggggtgggga cgaggagatg ccaagtgggg ccagggccaa gtctcaagtg
1021 gcagagaaag ggtcccaagt gctggtccca acctgaagct gtggagtgac tagatcacag
1081 gagcactgga ggaggagtgg gctctctgtg cagcctcaca gggctttgcc acggagccac
1141 agagagatgc tgggtccccg aggcctgtgg gcaggccgat cagtgtggcc ccagatcaag
1201 tcatgggagg aagctaagcc cttggttctt gccatcctga ggaaagatag caacagggag
1261 ggggagattt catcagtgtg gacagcctgt caacttagga tggatggctg agagggcttc
1321 ctaggagcca gtcagcaggg tggggtgggg ccagaggagc tctccagccc tgcctagtgg
1381 gcgccctgag ccccttgtcg tgtgctgagc atggcatgag gctgaagtgg caaccctggg
1441 gtctttgatg tcttgacaga ttgaccatct gtctccagcc aggccacccc tttccaaaat
1501 tccctcttct gccagtactc cccctgtacc acccattgct gatggcacac ccatccttaa
1561 gctaagacag gacgattgtg gtcctcccac actaaggcca cagcccatcc gcgtgctgtg
1621 tgtccctctt ccaccccaac ccctgctggc tcctctggga gcatccatgt cccggagagg
1681 ggtccctcaa cagtcagcct cacctgtcag accggggttc tcccggatct ggatggcgcc
1741 gccctctcag cagcgggcac gggtggggcg gggccgggcc gcagagcatg tgctggatct
1801 gttctgtgtg tctgtctgtg ggtgggggga ggggagggaa gtcttgtgaa accgctgatt
1861 gctgactttt gtgtgaagaa tcgtgttctt ggagcaggaa ataaagcttg ccccggggaa
1921 aaaaaaaaaa aaaa
//