LOCUS BC022532 2443 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens prion protein, mRNA (cDNA clone MGC:26679 IMAGE:4813982), complete cds. ACCESSION BC022532 VERSION BC022532.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2443) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2443) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: k Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..2443 /db_xref="H-InvDB:HIT000039610" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26679 IMAGE:4813982" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2443 /gene="PRNP" /gene_synonym="ASCR" /gene_synonym="CD230" /gene_synonym="prion" /gene_synonym="PrP" /gene_synonym="PrP27-30" /gene_synonym="PrP33-35C" /gene_synonym="PrPc" /db_xref="GeneID:5621" /db_xref="HGNC:HGNC:9449" /db_xref="MIM:176640" CDS 61..822 /gene="PRNP" /gene_synonym="ASCR" /gene_synonym="CD230" /gene_synonym="prion" /gene_synonym="PrP" /gene_synonym="PrP27-30" /gene_synonym="PrP33-35C" /gene_synonym="PrPc" /codon_start=1 /product="prion protein" /protein_id="AAH22532.1" /db_xref="GeneID:5621" /db_xref="HGNC:HGNC:9449" /db_xref="MIM:176640" /translation="MANLGCWMLVLFVATWSDLGLCKKRPKPGGWNTGGSRYPGQGSP GGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQGGGTHSQWNKP SKPKTNMKHMAGAAAAGAVVGGLGGYVLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQ VYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQY ERESQAYYKRGSSMVLFSSPPVILLISFLIFLIVG" BASE COUNT 683 a 502 c 583 g 675 t ORIGIN 1 agtcgctgac agccgcggcg ccgcgagctt ctcctctcct cacgaccgag agcagtcatt 61 atggcgaacc ttggctgctg gatgctggtt ctctttgtgg ccacatggag tgacctgggc 121 ctctgcaaga agcgcccgaa gcctggagga tggaacactg ggggcagccg atacccgggg 181 cagggcagcc ctggaggcaa ccgctaccca cctcagggcg gtggtggctg ggggcagcct 241 catggtggtg gctgggggca gcctcatggt ggtggctggg ggcagcccca tggtggtggc 301 tggggacagc ctcatggtgg tggctggggt caaggaggtg gcacccacag tcagtggaac 361 aagccgagta agccaaaaac caacatgaag cacatggctg gtgctgcagc agctggggca 421 gtggtggggg gccttggcgg ctacgtgctg ggaagtgcca tgagcaggcc catcatacat 481 ttcggcagtg actatgagga ccgttactat cgtgaaaaca tgcaccgtta ccccaaccaa 541 gtgtactaca ggcccatgga tgagtacagc aaccagaaca actttgtgca cgactgcgtc 601 aatatcacaa tcaagcagca cacggtcacc acaaccacca agggggagaa cttcaccgag 661 accgacgtta agatgatgga gcgcgtggtt gagcagatgt gtatcaccca gtacgagagg 721 gaatctcagg cctattacaa gagaggatcg agcatggtcc tcttctcctc tccacctgtg 781 atcctcctga tctctttcct catcttcctg atagtgggat gaggaaggtc ttcctgtttt 841 caccatcttt ctaatctttt tccagcttga gggaggcggt atccacctgc agccctttta 901 gtggtggtgt ctcactcttt cttctctctt tgtcccggat aggctaatca atacccttgg 961 cactgatggg cactggaaaa catagagtag acctgagatg ctggtcaagc cccctttgat 1021 tgagttcatc atgagccgtt gctaatgcca ggccagtaaa agtataacag caaataacca 1081 ttggttaatc tggacttatt tttggactta gtgcaacagg ttgaggctaa aacaaatctc 1141 agaacagtct gaaatacctt tgcctggata cctctggctc cttcagcagc tagagctcag 1201 tatactaatg ccctatctta gtagagattt catagctatt tagagatatt ttccatttta 1261 agaaaacccg acaacatttc tgccaggttt gttaggaggc cacatgatac ttattcaaaa 1321 aaatcctaga gattcttagc tcttgggatg caggctcagc ccgctggagc atgagctctg 1381 tgtgtaccga gaactggggt gatgttttac ttttcacagt atgggctaca cagcagctgt 1441 tcaacaagag taaatattgt cacaacactg aacctctggc tagaggacat attcacagtg 1501 aacataactg taacatatat gaaaggcttc tgggacttga aatcaaatgt ttgggaatgg 1561 tgcccttgga ggcaacctcc cattttagat gtttaaagga ccctatatgt ggcattcctt 1621 tctttaaact ataggtaatt aaggcagctg aaaagtaaat tgccttctag acactgaagg 1681 caaatctcct ttgtccattt acctggaaac cagaatgatt ttgacataca ggagagctgc 1741 agttgtgaaa gcaccatcat catagaggat gatgtaatta aaaaatggtc agtgtgcaaa 1801 gaaaagaact gcttgcattt ctttatttct gtctcataat tgtcaaaaac cagaattagg 1861 tcaagttcat agtttctgta attggctttt gaatcaaaga atagggagac aatctaaaaa 1921 atatcttagg ttggagatga cagaaatatg attgatttga agtggaaaaa gaaattctgt 1981 taatgttaat taaagtaaaa ttattccctg gattgtttga tattgtcacc tagcagatat 2041 gtattacttt tctgcaatgt tattattggc ttgcactttg tgagtattct atgtaaaaat 2101 atatatgtat ataaaatata tattgcatag gacagactta ggagttttgt ttagagcagt 2161 taacatctga agtgtctaat gcattaactt ttgtaaggta ctgaatactt aatatgtggg 2221 aaaccctttt gcgtggtcct taggcttaca atgtgcactg aatcgtttca tgtaagaatc 2281 caaagtggac accattaaca ggtctttgaa atatgcatgt actttatatt ttctatattt 2341 gtaactttgc atgttcttgt tttgttatat aaaaaaattg taaatgttta atatctgact 2401 gaaattaaac gagcgaagat gagcaccaaa aaaaaaaaaa aaa //