LOCUS BC022520 2011 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens RUN domain containing 3B, mRNA (cDNA clone MGC:26655
IMAGE:4793693), complete cds.
ACCESSION BC022520
VERSION BC022520.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2011)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2011)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923089.
FEATURES Location/Qualifiers
source 1..2011
/db_xref="H-InvDB:HIT000039599"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26655 IMAGE:4793693"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2011
/gene="RUNDC3B"
/gene_synonym="RPIB9"
/gene_synonym="RPIP9"
/db_xref="GeneID:154661"
/db_xref="HGNC:HGNC:30286"
CDS 363..1526
/gene="RUNDC3B"
/gene_synonym="RPIB9"
/gene_synonym="RPIP9"
/codon_start=1
/product="RUNDC3B protein"
/protein_id="AAH22520.1"
/db_xref="GeneID:154661"
/db_xref="HGNC:HGNC:30286"
/translation="MASRSLGGLSGIRGGGGGGGKKSLSARNAAVERRNLITVCRFSV
KTMIDRSCFETIDDSSPEFNNFAAILEQILSHRLKGQVTWFGYESPRSFWDYIRVACR
KVSQNCICSIENMENVSSSRAKGRAWIRVALMEKHLSEYISTALRDFKTTRRFYEDGA
IVLGEEANMLAGMLLGLNAIDFSFCLKGGGLDGSFPAVIDYTPYLKYIQSSDSISSDE
EELRTLGSSGSESSTPENVGPPFLMDENSWFNKCKRVKQKYQLTLEQKGYLEELLRLR
ENQLSESVSQNKILLQRIEDSDLAHKLEKEQLEYIIVELQDQLKSYQSLDQLSAEVSL
SQTSLDPGQSQEGDGKQDTLNVMSEGKEDTPSLLGLCGSPTSVKLQVSNKLKI"
BASE COUNT 570 a 412 c 503 g 526 t
ORIGIN
1 gaggggcaga cgggctcgcg cgcgcgccgt ctgctgaggt ccctcgggaa ggaggagagc
61 gtctgacgcc gacccgcagg cgcagcccgg cagtcggcgg cgcgccgagg gcggaggtgg
121 tgcgtgcgtg cgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtggagctc gggtgccaag
181 ggcgagccgt cagtccccgg gtgcgagtcc ctgctgtctt ccacaccctt cctccctcca
241 ggctcctttc ctacatcctt cccgcgcccc cacggttgcg gaccgagcga gaaccccctt
301 aagcaggtgt ggggggcgtg cggggtggca cgagacaaaa ggggcacggg ggtaagcccg
361 ccatggcctc ccggagcctg gggggcctga gcgggatccg cggcggtggc ggcggaggcg
421 gcaagaaaag cctgagcgcc cgcaatgctg cggtggagag gaggaacctg atcaccgtgt
481 gcaggttttc tgtgaagacc atgattgatc ggtcttgctt tgagacaatt gatgattctt
541 ctcctgaatt taacaatttt gcagctattt tggaacagat tttaagccac cggctaaaag
601 gtcaagtaac ctggtttggt tatgaaagtc ctcgtagctt ctgggactat atcagagtgg
661 cttgccggaa agtttcacag aattgtatct gcagcattga aaatatggaa aatgtcagtt
721 cttctagagc taagggtaga gcctggatca gagtagcact catggaaaaa catttatctg
781 aatacatctc tacagctctg agagacttca aaacaaccag gagattttat gaagatggag
841 caattgtctt gggtgaagaa gcaaatatgc ttgctggcat gcttctagga ctcaatgcta
901 ttgatttcag tttctgccta aagggagggg ggctggatgg cagttttcct gctgtaatag
961 actatacacc atatttgaag tatatccaaa gttctgatag tatcagtagt gatgaggagg
1021 agctaaggac tttgggaagc agtggtagcg aaagcagtac tccagagaat gtcggacctc
1081 ctttcctcat ggatgagaac agttggttca acaagtgtaa gagagttaaa caaaagtatc
1141 agcttaccct ggaacagaag ggttaccttg aagaactctt acgacttcga gagaaccaac
1201 tatctgaatc tgtctcccag aataaaatac tacttcaaag gattgaagat tccgatctgg
1261 ctcataaact ggagaaggaa caattagaat atataattgt ggagcttcaa gatcagctga
1321 aaagttatca aagtcttgac cagttatcag cagaagttag cctttctcag acttcactag
1381 atccaggcca gtcacaagaa ggagatggaa aacaagacac attaaatgta atgagtgaag
1441 gtaaggaaga tactccctca ttacttggcc tctgtggatc tccaacgtca gtcaagttac
1501 aagtctctaa caagcttaaa atctaatgac taccttgcaa gtcctacaac agagatgaca
1561 agtccaggcc taactccatc ctgaaaattt ttgtgtaaaa gccaaaactt tttatgttgt
1621 aaatgtttaa tttacatgtt tgactgctgg gaagaccttt gaaattttat attgttctgg
1681 tacatgtctg aaattctatt gcttggagag aatcccctcc agataagaga ttttgagtga
1741 aaaacataat gatcctgcca tttttcattt ttaaaattct tacatttgtc attgagaaag
1801 ttcaaaatgg aataggcttt aaaaaaaaaa aaaactttca aagatccgcc aaatcattca
1861 tagcaaattg tacatattgt tcagctgatt tttatatatt taaatacacc ttagtggcca
1921 gagactgact tcaaggtttt attccagaga ctccagagac ttaagctaag tattttttca
1981 ttctttcaga ttttcaaaaa aaaaaaaaaa a
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