LOCUS BC022507 3269 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase,
polypeptide 2, mRNA (cDNA clone MGC:26499 IMAGE:4792498), complete
cds.
ACCESSION BC022507
VERSION BC022507.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3269)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3269)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: b Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15451871.
FEATURES Location/Qualifiers
source 1..3269
/db_xref="H-InvDB:HIT000050773"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26499 IMAGE:4792498"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3269
/gene="B3GALT2"
/gene_synonym="beta3Gal-T2"
/gene_synonym="BETA3GALT2"
/gene_synonym="GLCT2"
/db_xref="GeneID:8707"
/db_xref="HGNC:HGNC:917"
/db_xref="MIM:603018"
CDS 716..1984
/gene="B3GALT2"
/gene_synonym="beta3Gal-T2"
/gene_synonym="BETA3GALT2"
/gene_synonym="GLCT2"
/codon_start=1
/product="UDP-Gal:betaGlcNAc beta
1,3-galactosyltransferase, polypeptide 2"
/protein_id="AAH22507.1"
/db_xref="GeneID:8707"
/db_xref="HGNC:HGNC:917"
/db_xref="MIM:603018"
/translation="MLQWRRRHCCFAKMTWNAKRSLFRTHLIGVLSLVFLFAMFLFFN
HHDWLPGRAGFKENPVTYTFRGFRSTKSETNHSSLRNIWKETVPQTLRPQTATNSNNT
DLSPQGVTGLENTLSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAE
PGQIEARRAIRQTWGNESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQ
EYLDTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHN
YFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGI
RRLHLEDVYVGICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIK
YWNHLQQNKHNACANAAKEKAGRYRHRKLH"
BASE COUNT 1158 a 583 c 583 g 945 t
ORIGIN
1 gcgtttaaac tgctgcctgc ctgtgcagca gctgaggaac cgtggatttc atattataga
61 ctaaaacccc attaaaactg ctcaaaatcc ttcctgcagc tgccaggcaa caacgaaaga
121 agagaggtaa atcctattct tttccaatac aactgaagca ctacatttta gctctggctg
181 ctttacattg cagctcagtg ttattagtag aaatatggat actgagacga gaacacagca
241 ctgcattgtc cagccaggaa aatagcagat gtaaaaagct tcaatgcatc aactgtcggg
301 aagagtcaac agtgctacaa gcagaacggg caactacagc tcttttgttt aacgaaagag
361 agaaaatgaa agaaagggaa aatttcagaa gactaggacc catatgaaca aggagggtaa
421 ctcgaagaca agcagacaga tggacacttt ggatactgtg aaaagcaatc gcaggaggca
481 gactgttggg ggatgtgcgc atgttcgata gcatcttttt tgctgaagtg atggcgtgcc
541 aaaagtattt tcagtgggca taatcctctt cacataaatg gcctgaccaa ggaagaatga
601 ctacaagaga gacaatgtga ctgaattaga aaatgattgc caaagaatag tattaaggag
661 aagaaaacat ttttggtcac caatctctca tataccacta ctggatattt acaacatgct
721 tcagtggagg agaagacact gctgctttgc aaagatgacc tggaatgcca aaaggtctct
781 gttccgcact catcttattg gagtactttc tctagtgttt ctttttgcta tgtttttgtt
841 tttcaatcat catgactggc tgccaggcag agctggattc aaagaaaacc ctgtgacata
901 cactttccga ggatttcggt caacaaaaag tgagacaaac cacagctccc ttcggaacat
961 ttggaaagaa acagtccctc aaaccctgag gcctcaaaca gcaactaact ctaataacac
1021 agacctgtca ccacaaggag ttacaggcct ggagaataca cttagtgcca atggaagtat
1081 ttacaatgaa aaaggtactg gacatccaaa ttcttaccat ttcaaatata ttattaatga
1141 gcctgaaaaa tgccaagaga aaagtccttt tttaatacta ctaatagctg cagagcctgg
1201 acaaatagaa gctagaagag ctattcggca aacttggggc aatgaaagtc tagcacctgg
1261 tattcaaatc acaagaatat ttttgttggg cttaagtatt aagctaaatg gctaccttca
1321 acgtgcaata ctggaagaaa gcagacaata tcatgatata attcaacagg aatacttaga
1381 tacgtactat aatttgacca ttaaaacact aatgggcatg aactgggttg caacatactg
1441 tccacatatt ccatatgtta tgaaaactga cagtgacatg tttgtcaaca ctgaatattt
1501 aatcaataag ttactgaagc cagatctgcc tcccagacat aactatttca ctggttacct
1561 aatgcgagga tatgcaccca atcgaaacaa agatagcaag tggtacatgc caccagacct
1621 ctacccaagt gagcgttatc ctgtcttctg ttctggaact ggttatgttt tttctggaga
1681 tctggcagaa aagattttta aagtttcttt aggtatccgc cgtttgcact tggaagatgt
1741 atatgtaggg atctgtcttg ccaagttgag aattgatcct gtaccccctc ccaatgagtt
1801 tgtgttcaat cactggcgag tctcttattc gagctgtaaa tacagccacc taattacctc
1861 tcatcagttc cagcctagtg aactgataaa atactggaac catttacaac aaaataagca
1921 caatgcctgt gccaacgcag caaaagaaaa ggcaggcagg tatcgccacc gtaaactaca
1981 ttagaaaaga caattttttt tcaaatgtgc aatttgtaaa tattgctaaa agcatgtata
2041 gttagaactg attacatccg taggacaagt tttagttaaa actcatcaca taaagaaatt
2101 caagaagtat ttttttaatt tctgaagaag ttaattctta aaactataac attatataac
2161 aaaaaaggtt tcccaaaaca atctatttaa aaaactgtat aaggagattc tgtgtattaa
2221 catgcaataa caagcatgca taaatcaatg gttcaagtct tctgttaggg gccaataaaa
2281 tgtatctgca tatgttttcc acataaattt taattcaaga aatgacagtc aaaagatcct
2341 tcattttaga ttaagctttt cattttaata tataattttg taaataaaac atcactatca
2401 attttaagga aactttttaa ttgtgcaaag gataaatttt ttgacctatt ttagggttct
2461 aaatgcaata agatttagtt gagttattcc acaaacacat tataaagttc agatgtttca
2521 tcaatgcagt tctcacgaaa gtatttactt tttaaaaata actgagatat tattttaaat
2581 ttcttttatt aatactttct tttattaata tatgggggaa aattattttg acatgacgtg
2641 gtaaaatgtg aaaaactaat gtgtctcagg ctcaagtttt tatagttatt aaatgtttca
2701 aaatagacaa gttttgtttc ctcattgatg ttaagaacca aactcctatt tcaatgagtt
2761 attggattag accaattact gcactcttaa acagcaccac catttaattt catgtatatc
2821 taacttcgaa tatatctgta aagataatcg aagcaaaagt aatcacttaa aggcacaaat
2881 aggatgtact gttgaaaaag ataaagagtg caggtgcagt ttcattcaac acatttttaa
2941 gatgcatgtc tgccaaaatg caacatacgg gaagtttatt tcctgacagc aggtgtacac
3001 atgccaacac ttaatcattt tatggcacct atttctttct tggagtgcca agtttgcaaa
3061 cctgcagttt ttaatttggt agatgacaaa tattctgaat caccaattaa aaaccttttt
3121 gggagggatg gggaaaacta caaacgtttg acaaacacaa ttctaggatg aacaatgtat
3181 acaatgcact tttatgaagt ttttaaaaat aaaggaaaac aaaaaacttt aaaaaaaaaa
3241 aaaaaaaaaa aaagaaaaaa aaaaaaaaa
//