LOCUS BC022480 2322 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens phosphodiesterase 1A, calmodulin-dependent, mRNA (cDNA
clone MGC:26303 IMAGE:4814064), complete cds.
ACCESSION BC022480
VERSION BC022480.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2322)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2322)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51102298.
FEATURES Location/Qualifiers
source 1..2322
/db_xref="H-InvDB:HIT000039570"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26303 IMAGE:4814064"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2322
/gene="PDE1A"
/gene_synonym="HCAM1"
/gene_synonym="HSPDE1A"
/gene_synonym="MGC26303"
/db_xref="GeneID:5136"
/db_xref="HGNC:HGNC:8774"
/db_xref="MIM:171890"
CDS 202..1839
/gene="PDE1A"
/gene_synonym="HCAM1"
/gene_synonym="HSPDE1A"
/gene_synonym="MGC26303"
/codon_start=1
/product="phosphodiesterase 1A, calmodulin-dependent"
/protein_id="AAH22480.1"
/db_xref="GeneID:5136"
/db_xref="HGNC:HGNC:8774"
/db_xref="MIM:171890"
/translation="MGSSATEIEELENTTFKYLTGEQTEKMWQRLKGILRCLVKQLER
GDVNVVDLKKNIEYAASVLEAVYIDETRRLLDTEDELSDIQTDSVPSEVRDWLASTFT
RKMGMTKKKPEEKPKFRSIVHAVQAGIFVERMYRKTYHMVGLAYPAAVIVTLKDVDKW
SFDVFALNEASGEHSLKFMIYELFTRYDLINRFKIPVSCLITFAEALEVGYSKYKNPY
HNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTNNFHIQTRS
DVAILYNDRSVLENHHVSAAYRLMQEEEMNILINLSKDDWRDLRNLVIEMVLSTDMSG
HFQQIKNIRNSLQQPEGIDRAKTMSLILHAADISHPAKSWKLHYRWTMALMEEFFLQG
DKEAELGLPFSPLCDRKSTMVAQSQIGFIDFIVEPTFSLLTDSTEKIVIPLIEEASKA
ETSSYVASSSTTIVGLHIADALRRSNTKGSMSDGSYSPDYSLAAVDLKSFKNNLVDII
QQNKERWKELAAQGESDLHKNSEDLVNAEEKHDETHS"
BASE COUNT 750 a 444 c 484 g 644 t
ORIGIN
1 ggtggggtgg tgagcagtgg atatatgcct gtcaaagtca atagcaaatc tgtcagagtc
61 ttccctcagc tttgtacatc agcactgttt tgatagataa gagaggctac tgtataagtg
121 tgtaagattt gtaatggact gaggaatgct tgttctagct gctgaaactg actgtaactg
181 tattgtctta ggagcatcat catggggtct agtgccacag agattgaaga attggaaaac
241 accactttta agtatcttac aggagaacag actgaaaaaa tgtggcagcg cctgaaagga
301 atactaagat gcttggtgaa gcagctggaa agaggtgatg ttaacgtcgt cgacttaaag
361 aagaatattg aatatgcggc atctgtgctg gaagcagttt atatcgatga aacaagaaga
421 cttctggata ctgaagatga gctcagtgac attcagactg actcagtccc atctgaagtc
481 cgggactggt tggcttctac ctttacacgg aaaatgggga tgacaaaaaa gaaacctgag
541 gaaaaaccaa aatttcggag cattgtgcat gctgttcaag ctggaatttt tgtggaaaga
601 atgtaccgaa aaacatatca tatggttggt ttggcatatc cagcagctgt catcgtaaca
661 ttaaaggatg ttgataaatg gtctttcgat gtatttgccc taaatgaagc aagtggagag
721 catagtctga agtttatgat ttatgaactg tttaccagat atgatcttat caaccgtttc
781 aagattcctg tttcttgcct aatcaccttt gcagaagctt tagaagttgg ttacagcaag
841 tacaaaaatc catatcacaa tttgattcat gcagctgatg tcactcaaac tgtgcattac
901 ataatgcttc atacaggtat catgcactgg ctcactgaac tggaaatttt agcaatggtc
961 tttgctgctg ccattcatga ttatgagcat acagggacaa caaacaactt tcacattcag
1021 acaaggtcag atgttgccat tttgtataat gatcgctctg tccttgagaa tcaccacgtg
1081 agtgcagctt atcgacttat gcaagaagaa gaaatgaata tcttgataaa tttatccaaa
1141 gatgactgga gggatcttcg gaacctagtg attgaaatgg ttttatctac agacatgtca
1201 ggtcacttcc agcaaattaa aaatataaga aacagtttgc agcagcctga agggattgac
1261 agagccaaaa ccatgtccct gattctccac gcagcagaca tcagccaccc agccaaatcc
1321 tggaagctgc attatcggtg gaccatggcc ctaatggagg agtttttcct gcagggagat
1381 aaagaagctg aattagggct tccattttcc ccactttgtg atcggaagtc aaccatggtg
1441 gcccagtcac aaataggttt catcgatttc atagtagagc caacattttc tcttctgaca
1501 gactcaacag agaaaattgt tattcctctt atagaggaag cctcaaaagc cgaaacttct
1561 tcctatgtgg caagcagctc aaccaccatt gtggggttac acattgctga tgcactaaga
1621 cgatcaaata caaaaggctc catgagtgat gggtcctatt ccccagacta ctcccttgca
1681 gcagtggacc tgaagagttt caagaacaac ctggtggaca tcattcagca gaacaaagag
1741 aggtggaaag agttagctgc acaaggtgaa tctgatcttc ataagaactc agaagactta
1801 gtaaatgctg aagaaaaaca tgatgagaca cattcatagg cccgaaacac cttaaagact
1861 tctgtcattt taaacatgag aggacaatga aatcagcatg aaaacatcct aaattctcaa
1921 ctttccacaa agctatggct cttctttcaa catagaattg gattgggcca ttttaattga
1981 ctcctataca aggaattaag aagaacataa attttgagct agtaactctg gccaaataaa
2041 tacactcaag tttttatcag agtttttggc cagtgcttct gccatttttt tccctccaca
2101 atttggcctt cttcaatcaa gccagataaa tttttgagac aaaagccaga cagtttttaa
2161 tttttcttgc tttgaaccct gtcgtaatga ctgtgcaata catgtgcaga agatgaggta
2221 ttttaaaatt tacttccttg cactgtctta cacagagtgc tataactata aatttttcaa
2281 ggtcttaaat aaaaggaagc aaaaacaaaa aaaaaaaaaa aa
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