LOCUS BC022476 1906 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens sperm flagellar 1, mRNA (cDNA clone MGC:26275
IMAGE:4816764), complete cds.
ACCESSION BC022476
VERSION BC022476.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1906)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1906)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: m Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359899.
FEATURES Location/Qualifiers
source 1..1906
/db_xref="H-InvDB:HIT000039567"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26275 IMAGE:4816764"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1906
/gene="SPEF1"
/gene_synonym="CLAMP"
/gene_synonym="DKFZP434I114"
/gene_synonym="SPEF1A"
/db_xref="GeneID:25876"
/db_xref="HGNC:HGNC:15874"
/db_xref="MIM:610674"
CDS 128..616
/gene="SPEF1"
/gene_synonym="CLAMP"
/gene_synonym="DKFZP434I114"
/gene_synonym="SPEF1A"
/codon_start=1
/product="SPEF1 protein"
/protein_id="AAH22476.1"
/db_xref="GeneID:25876"
/db_xref="HGNC:HGNC:15874"
/db_xref="MIM:610674"
/translation="MASSVDEEALHQLYLWVDNIPLSRPKRNLSRDFSDGVLVAEVIK
FYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLKRLNFSVPDDVMRKIAQCAPGVVEL
VLIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGKVAFSISPSRLELSFCPSSC
HL"
BASE COUNT 377 a 558 c 647 g 324 t
ORIGIN
1 agtctctgga ttaggcaggc agaggcagtt atgggcttct gcagtggcga gaaaggaagc
61 gcctgaaggg tcgtgaggct ggggcgggac ccggcaccgc tggggcggcc aggccgtgag
121 gacttcaatg gcgagcagcg tggacgagga ggcgctgcac cagctgtacc tgtgggtaga
181 caacatccct ctgtcccggc ccaagcgaaa cctctcccgg gactttagcg atggagtcct
241 tgttgcagag gtcatcaagt tttacttccc caagatggtg gagatgcaca attatgtccc
301 cgccaactct ctccagcaga agctcagcaa ctggggtcat ctgaacagga aggtactgaa
361 gaggctgaac ttttcagtac cggatgacgt gatgcgcaag atcgcgcagt gcgccccagg
421 cgtggtggag ctggtgctca tcccgctgag gcagcgcctg gaggagaggc agaggcgcag
481 gaagcagggc gccggctcct tacaggagct ggctccccag gatggcagtg gctacatgga
541 tgtgggtaag gtggcctttt ccatttctcc ctcccggttg gagctttcct tctgtccttc
601 ttcctgtcac ttgtaagagt ggaagtaggg agggggaagc aggagaatga gactccagca
661 cagtcattcc tccacttgcc ttgtctcagg tgtatcccag aaggcccgag gtgaaggtgt
721 cccggacccc cagggagggg gtcagctcag gtaaagaagc tgggagttcc agacttcacc
781 aggctggtga tctctgcaca cagctggggt tggggggcac ggtacgctga gcctgagacg
841 ggaggcagga aaggggctag agggggagaa gggaaggcct ggtcgagggc cctggaaggg
901 tgagtgtagg gcccgaggtc caagcctccg ctaagctgct tctcacccca gctgggaccg
961 gccaccggcg cctcagcctc cagcgtataa ccgggcgttg cagggcgacc ccagcttcgt
1021 cctccagatc gctgaaaagg agcaggagct gttggcctct caagagaccg tgcaggtcct
1081 gcagatgaag gtaaggcgcc tggagcacct gctccagctc aagaatgtgc ggatcgaaga
1141 cctctcccgg cggctccagc aggcggagcg taagcagcgg tgagcggcgg cccgggccgc
1201 gcggggacgc ccgggtaccc gccagagccc cgacgccgcg ccggacccac ccaccgatgg
1261 atagaccatt gggagggcgg agcccgctgc tctcacgagc ctgctggggc ccgagtgccc
1321 tccttccttg ggatgggtga gcgtgggagg agatgggaca ggaactctag gagcgcaggc
1381 ccgggactga gccgcctcct accactccgg agatccgggt caggagaatg gaccgctttc
1441 cagagcccag aagccacgtg cagagaccta gcctgtcccc caaagcagtg tccaacacct
1501 tgggcccggc cttgcatctc ccggcgctgg gccttggggg gcggtccctt ggctctgtcc
1561 acacccccag aatcaggtcc ccgcccagct ccgaggacgg cggcgtctcc atccacgcta
1621 gttccccatg ccctcagcca tgggggaatc tgtcccgggc cgctgagggg ctcccctgcc
1681 cctcctggga gcttacctgg gacccacctc ggcgacggag accgcagcag ctggagagga
1741 aggggtgagg cgtgggatcg ccaggagtag ggaggacatc gacgatgtgc ccgtagcagt
1801 cacccctccc tcctcgcgca cggggtactg aggcggaagg tttgaaggtt acggctcagg
1861 gctgccccat taaagtcagt gttgtgttct aaaaaaaaaa aaaaaa
//