LOCUS BC022466 2431 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc finger protein 223, mRNA (cDNA clone MGC:26193
IMAGE:4793666), complete cds.
ACCESSION BC022466
VERSION BC022466.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2431)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2431)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33859844.
FEATURES Location/Qualifiers
source 1..2431
/db_xref="H-InvDB:HIT000039561"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26193 IMAGE:4793666"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2431
/gene="ZNF223"
/db_xref="GeneID:7766"
/db_xref="HGNC:HGNC:13016"
CDS 254..1702
/gene="ZNF223"
/codon_start=1
/product="zinc finger protein 223"
/protein_id="AAH22466.1"
/db_xref="GeneID:7766"
/db_xref="HGNC:HGNC:13016"
/translation="MTMSKEAVTFKDVAVVFTEEELGLLDLAQRKLYRDVMLENFRNL
LSVGHQPFHRDTFHFLREEKFWMMDIATQREGNSGGKIQPEMKTFPEAGPHEGWSCQQ
IWEEIASDLTRPQDSTIKSSQFFEQGDAHSQVEEGISIMHTGQKPSNCGKCKQSFSDM
SIFDLPQQIRSAEKSHSCDECGKSFCYISALHIHQRVHLGEKLFKCDVCGKEFSQSLH
LQTHQRVHTGEKPFKCEQCGRGFRCRSALTVHCKLHMGEKHYNCEACGRAFIHDFQLQ
KHQRIHTGEKPFKCEICSVSFRLRSSLNRHCVVHTGKKPNSTGEYGKGFIRRLDLCKH
QTIHTGEKPYNCKECGKSFRRSSYLLIHQRVHTGEKPYKCDKCGKSYITKSGLDLHHR
AHTGERPYNCDDCGKSFRQASSILNHKRLHCRKKPFKCEDCGKKLVYRSYRKDQQKNH
SGENPSKCEDCGKRYKRRLNLDIILSLFLNDT"
BASE COUNT 741 a 490 c 556 g 644 t
ORIGIN
1 gcagagagga cacttccggt ctcctagtct gaggttcctg ctttaatgac cggggtagtt
61 tgagccattt ctgcgtcttg caggacattt tgaacgaacc ccctttgctt gaggctcgca
121 accacccgat gatcgatgat cgtctcaggg gaaaagaagc cttggcgaag agcagaggtt
181 tagaggcaca attctgcttt ccctggaact gtgtcattca ggactctgca aattccctaa
241 agtaggagga aaaatgacca tgtccaagga ggcagtgacc ttcaaggatg tggcagtggt
301 cttcactgag gaggagctgg ggctgctgga ccttgcccag aggaagctgt atcgagatgt
361 gatgctggag aacttcagga acctgctgtc agtggggcat caaccattcc accgagatac
421 tttccacttt ctaagggagg aaaagttttg gatgatggat atagcaaccc aaagagaagg
481 gaattcagga ggcaagatcc aacctgagat gaagactttt ccagaagcag gaccacatga
541 agggtggtcc tgccagcaga tctgggaaga aattgcaagt gatttaacca ggcctcaaga
601 ctctaccata aagagctctc agttctttga acagggtgat gcccactccc aggttgagga
661 aggaatatct ataatgcaca caggacagaa accttccaat tgtgggaagt gtaaacaatc
721 cttcagtgat atgtccatct ttgatcttcc tcagcaaata cgctcagcag agaagtctca
781 ttcctgtgat gagtgtggaa aaagcttctg ttacatctca gcacttcata ttcatcagag
841 agtccacctg ggagagaaac tctttaagtg tgacgtgtgt ggtaaggaat tcagtcagag
901 tttacatctg caaactcatc agagagtcca tactggagag aaacctttca aatgtgaaca
961 atgtgggaga ggcttcagat gtagatcagc acttacagtt cattgcaaat tacacatggg
1021 agagaaacat tataattgtg aggcatgtgg gagggccttc attcatgatt tccagcttca
1081 gaaacatcag agaattcaca caggggagaa gccattcaaa tgtgagatat gtagtgtgag
1141 cttccgtctt aggtcaagtc ttaataggca ttgtgtggtc cacacaggaa agaaaccaaa
1201 cagcactggg gaatatggaa aaggcttcat tcgtaggctg gatttgtgta agcatcagac
1261 gatccacaca ggagagaaac catataattg taaagaatgt gggaagagct tcagacggtc
1321 ctcctatctt ttgatccatc agcgagtcca cactggagaa aagccataca aatgtgacaa
1381 gtgtgggaag agctacatta ctaagtcagg tcttgacttg caccacagag cccacacagg
1441 agagagacct tataactgtg atgactgtgg gaagagcttt agacaggcct caagtatttt
1501 gaatcataag agactccatt gccgaaaaaa accattcaaa tgtgaggatt gtggaaagaa
1561 gcttgtatac cggtcatacc gtaaagacca acaaaaaaac cacagtggag aaaatccatc
1621 caaatgtgaa gactgtggga agcgctacaa gaggcgcttg aatcttgata taattttatc
1681 attattttta aatgacacgt aagtgttgta catatttatg gggtacagtg tgatatttaa
1741 atatatgtat atgatgtata atgatcaaat cagtgtaatt agcacattta tcacctcaat
1801 tatctctttt ttgtgttgag aaaattaaaa attcattgtt ccagcagttt gaaaataaat
1861 tgttgtcgat gatagtcacc tttagtgctg cagaacagca gaacttcttc ctcttatcta
1921 cctgtacttt tgcatccatt ggccaacctt tggccatccc acctatccct tacccttccc
1981 tgcctctaga gccactgttc tcactacttc taagaaatca gctttttaag cttccccatg
2041 tgattgagga cagtttgaag ttagtgtttc agccatagct cagcataccc cagtggtcgt
2101 gggactgtca gagcagagaa tgctgcaggg tttctaacag aagtttgaca attagttatt
2161 attcaggaga caggtcttag tataagagtt tgttcacaca ctttcaaaac actaatgatg
2221 aacatgtcaa aattgatgac cactagaatg tcagccacat gtgtctttgt atttttgctg
2281 catccttaca ttgcttgagt ctggaagatt gaggctgcag tgacctatgg tagtgctact
2341 gcactccagc cagggcaaca gagtgagacc ctgtctccaa aaaaaaaaat taaataaata
2401 cctttctttg tttccaaaaa aaaaaaaaaa a
//