LOCUS BC022393 1748 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens teratocarcinoma-derived growth factor 1, mRNA (cDNA
clone MGC:24110 IMAGE:4615416), complete cds.
ACCESSION BC022393
VERSION BC022393.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1748)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1748)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507424.
FEATURES Location/Qualifiers
source 1..1748
/db_xref="H-InvDB:HIT000039518"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24110 IMAGE:4615416"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1748
/gene="TDGF1"
/gene_synonym="CR"
/gene_synonym="CRGF"
/gene_synonym="CRIPTO"
/gene_synonym="Cripto-1"
/db_xref="GeneID:6997"
/db_xref="HGNC:HGNC:11701"
/db_xref="MIM:187395"
CDS 183..749
/gene="TDGF1"
/gene_synonym="CR"
/gene_synonym="CRGF"
/gene_synonym="CRIPTO"
/gene_synonym="Cripto-1"
/codon_start=1
/product="teratocarcinoma-derived growth factor 1"
/protein_id="AAH22393.1"
/db_xref="GeneID:6997"
/db_xref="HGNC:HGNC:11701"
/db_xref="MIM:187395"
/translation="MDCRKMARFSYSVIWIMAISKAFELGLVAGLGHQEFARPSRGYL
AFRDDSIWPQEEPAIRPRSSQRVPPMGIQHSKELNRTCCLNGGTCMLGSFCACPPSFY
GRNCEHDVRKENCGSVPHDTWLPKKCSLCKCWHGQLRCFPQAFLPGCDGLVMDEHLVA
SRTPELPPSARTTTFMLVGICLSIQSYY"
BASE COUNT 463 a 392 c 385 g 508 t
ORIGIN
1 agtttcccct ggacgccttg ctcctgcttc tgctacgacc ttctggggaa aacgaatttc
61 tcattttctt cttaaattgc cattttcgct ttaggagatg aatgttttcc tttggctgtt
121 ttggcaatga ctctgaatta aagcgatgct aacgcctctt ttccccctaa ttgttaaaag
181 ctatggactg caggaagatg gcccgcttct cttacagtgt gatttggatc atggccattt
241 ctaaagcctt tgaactggga ttagttgccg ggctgggcca tcaggaattt gctcgtccat
301 ctcggggata cctggccttc agagatgaca gcatttggcc ccaggaggag cctgcaattc
361 ggcctcggtc ttcccagcgt gtgccgccca tggggataca gcacagtaag gagctaaaca
421 gaacctgctg cctgaatggg ggaacctgca tgctggggtc cttttgtgcc tgccctccct
481 ccttctacgg acggaactgt gagcacgatg tgcgcaaaga gaattgtggg tctgtgcccc
541 atgacacctg gctgcccaag aagtgttccc tgtgtaaatg ctggcacggt cagctccgct
601 gctttcctca ggcatttcta cccggctgtg atggccttgt gatggatgag cacctcgtgg
661 cttccaggac tccagaacta ccaccgtctg cgcgtactac cacttttatg ctagttggca
721 tctgcctttc tatacaaagc tactattaat cgacattgac ctatttccag aaatacaatt
781 ttagatatca tgcaaatttc atgaccagta aaggctgctg ctacaatgtc ctaactgaaa
841 gatgatcatt tgtagttgcc ttaaaataat gaatacattt ccaaaatggt ctctaacatt
901 tccttacaga actacttctt acttctttgc cctgccctct cccaaaaaac tacttctttt
961 ttcaaaagaa agtcagccat atctccattg tgcctaagtc cagtgtttct tttttttttt
1021 tttttgagac ggagtctcac tctgtcaccc aggctggact gcaatgacgc gatcttggtt
1081 cactgcaacc tccgcatccg gggttcaagc cattctcctg cctcagcctc ccaagtaact
1141 gggattacag gcatgtgtca ccatgcccag ctaatttttt tgtattttta gtagagatgg
1201 gggtttcacc atattggcca gtctggtctc gaactcctga ccttgtgatc cactcgcctc
1261 agcctctcga agtgctgaga ttacacacgt gagcaactgt gcaaggcctg gtgtttcttg
1321 atacatgtaa ttctaccaag gtcttcttaa tatgttcttt taaatgattg aattatatgt
1381 tcagattatt ggagactaat tctaatgtgg accttagaat acagttttga gtagagttga
1441 tcaaaatcaa ttaaaatagt ctctttaaaa ggaaagaaaa catctttaag gggaggaacc
1501 agagtgctga aggaatggaa gtccatctgc gtgtgtgcag ggagactggg taggaaagag
1561 gaagcaaata gaagagagag gttgaaaaac aaaatgggtt acttgattgg tgattaggtg
1621 gtggtagaga agcaagtaaa aaggctaaat ggaagggcaa gtttccatca tctatagaaa
1681 gctatataag acaagaaatc cccttttttt cccaaaggca aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaa
//