LOCUS BC022354 1080 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:23846 IMAGE:4292526), complete cds. ACCESSION BC022354 VERSION BC022354.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1080) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1080) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 36 Row: b Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1080 /db_xref="H-InvDB:HIT000039494" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23846 IMAGE:4292526" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1080 /gene="PSMA6" /gene_synonym="IOTA" /gene_synonym="MGC22756" /gene_synonym="MGC2333" /gene_synonym="MGC23846" /gene_synonym="p27K" /gene_synonym="PROS27" /db_xref="GeneID:5687" /db_xref="HGNC:HGNC:9535" /db_xref="MIM:602855" CDS 31..771 /gene="PSMA6" /gene_synonym="IOTA" /gene_synonym="MGC22756" /gene_synonym="MGC2333" /gene_synonym="MGC23846" /gene_synonym="p27K" /gene_synonym="PROS27" /codon_start=1 /product="proteasome (prosome, macropain) subunit, alpha type, 6" /protein_id="AAH22354.1" /db_xref="GeneID:5687" /db_xref="HGNC:HGNC:9535" /db_xref="MIM:602855" /translation="MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRG KDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWK YKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYY CGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVG VVTVENPKFRILTEAEIDAHLVALAERD" BASE COUNT 432 a 183 c 214 g 251 t ORIGIN 1 gattgtgttt aaagtagtgc ttgtaccaac atgtcccgtg gttccagcgc cggttttgac 61 cgccacatta ccattttttc acccgagggt cggctctacc aagtagaata tgcttttaag 121 gctattaacc agggtggcct tacatcagta gctgtcagag ggaaagactg tgcagtaatt 181 gtcacacaga agaaagtacc tgacaaatta ttggattcca gcacagtgac tcacttattc 241 aagataactg aaaacattgg ttgtgtgatg accggaatga cagctgacag cagatcccag 301 gtacagaggg cacgctatga ggcagctaac tggaaataca agtatggcta tgagattcct 361 gtggacatgc tgtgtaaaag aattgccgat atttctcagg tctacacaca gaatgctgaa 421 atgaggcctc ttggttgttg tatgatttta attggtatag atgaagagca aggccctcag 481 gtatataagt gtgatcctgc aggttactac tgtgggttta aagccactgc agcgggagtt 541 aaacaaactg agtcaaccag cttccttgaa aaaaaagtga agaagaaatt tgattggaca 601 tttgaacaga cagtggaaac tgcaattaca tgcctgtcta ctgttctatc aattgatttc 661 aaaccttcag aaatagaagt tggagtagtg acagttgaaa atcctaaatt caggattctt 721 acagaagcag agattgatgc tcaccttgtt gctctagcag agagagacta aacattgtcg 781 ttagtttacc agatccgtga tgccacttac ctgtgtgttt ggtaacaaca aaccaacatc 841 atggaggtcc ctggattgaa aaaggagcct ctcccactcc tcctaccacc gaagtggtta 901 ggactctata taaataaaaa caaggctttt ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa 961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //