LOCUS BC022318 1301 bp mRNA linear HUM 29-AUG-2008 DEFINITION Homo sapiens surfactant protein D, mRNA (cDNA clone MGC:22626 IMAGE:4696173), complete cds. ACCESSION BC022318 VERSION BC022318.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1301) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1301) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 36 Row: n Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 61699225. FEATURES Location/Qualifiers source 1..1301 /db_xref="H-InvDB:HIT000039466" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22626 IMAGE:4696173" /tissue_type="Lung" /clone_lib="NIH_MGC_77" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1301 /gene="SFTPD" /gene_synonym="COLEC7" /gene_synonym="PSP-D" /gene_synonym="SP-D" /db_xref="GeneID:6441" /db_xref="HGNC:HGNC:10803" /db_xref="MIM:178635" CDS 45..1172 /gene="SFTPD" /gene_synonym="COLEC7" /gene_synonym="PSP-D" /gene_synonym="SP-D" /codon_start=1 /product="surfactant protein D" /protein_id="AAH22318.1" /db_xref="GeneID:6441" /db_xref="HGNC:HGNC:10803" /db_xref="MIM:178635" /translation="MLLFLLSALVLLTQPLGYLEAGMKTYSHRTMPSACTLVMCSSVE SGLPGRDGRDGREGPRGEKGDPGLPGAAGQAGMPGQAGPVGPKGDNGSVGEPGPKGDT GPSGPPGPPGVPGPAGREGPLGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGARG LAGPKGERGVPGERGVPGNTGAAGSAGAMGPQGSPGARGPPGLKGDKGIPGDKGAKGE SGLPDVASLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTE AQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVY SNWAPGKPNDDGGSEDCVEIFTNGKWNDRACGEKRLVVCEF" BASE COUNT 333 a 321 c 421 g 226 t ORIGIN 1 gagtttgctt ggagctcctg gggcctaaca aaaagaaacc tgccatgctg ctcttcctcc 61 tctctgcact ggtcctgctc acacagcccc tgggctacct ggaagcagga atgaagacct 121 actcccacag aacaatgccc agtgcttgca ccctggtcat gtgtagctca gtggagagtg 181 gcctgcctgg tcgcgatgga cgggatggga gagagggccc tcggggcgag aagggggacc 241 caggtttgcc aggagctgca gggcaagcag ggatgcctgg acaagctggc ccagttgggc 301 ccaaagggga caatggctct gttggagaac ctggaccaaa gggagacact gggccaagtg 361 gacctccagg acctcccggt gtgcctggtc cagctggaag agaaggtccc ctggggaagc 421 aggggaacat aggacctcag ggcaagccag gcccaaaagg agaagctggg cccaaaggag 481 aagtaggtgc cccaggcatg cagggctcgg caggggcaag aggcctcgca ggccctaagg 541 gagagcgagg tgtccctggt gagcgtggag tccctggaaa cacaggggca gcagggtctg 601 ctggagccat gggtccccag ggaagtccag gtgccagggg acccccggga ttgaaggggg 661 acaaaggcat tcctggagac aaaggagcaa agggagaaag tgggcttcca gatgttgctt 721 ctctgaggca gcaggttgag gccttacagg gacaagtaca gcacctccag gctgctttct 781 ctcagtataa gaaagttgag ctcttcccaa atggccaaag tgtcggggag aagattttca 841 agacagcagg ctttgtaaaa ccatttacgg aggcacagct gctgtgcaca caggctggtg 901 gacagttggc ctctccacgc tctgccgctg agaatgccgc cttgcaacag ctggtcgtag 961 ctaagaacga ggctgctttc ctgagcatga ctgattccaa gacagagggc aagttcacct 1021 accccacagg agagtccctg gtctattcca actgggcccc agggaagccc aacgatgatg 1081 gcgggtcaga ggactgtgtg gagatcttca ccaatggcaa gtggaatgac agggcttgtg 1141 gagaaaagcg tcttgtggtc tgcgagttct gagccaactg gggtgggtgg ggcagtgctt 1201 ggcccaggag tttggccaga agtcaaggct tagaccctca tgctgccaat atcctaataa 1261 aaaggtgacc ataaaaaaaa aaaaaaaaaa aaaaaaaaaa a //