LOCUS BC022307 1731 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens ataxia telangiectasia mutated, mRNA (cDNA clone
IMAGE:4290281), with apparent retained intron.
ACCESSION BC022307
VERSION BC022307.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1731)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1731)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20336200
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1731
/db_xref="H-InvDB:HIT000090574"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4290281"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 515 a 322 c 348 g 546 t
ORIGIN
1 gaattcttaa cagtaaagtt ctgtaattga gacagaattc ccaaataaag tcaagagtaa
61 aattcagata gaggagcagt tatacatcag tgggaaattt ggttggcaga aaaattacca
121 ggtcatacaa cttaatgata gacctgaagt cttatttaaa atgattctct aaaattgaag
181 aattggatta agggggcctt gtttggctga ttttcatact ttttcctctc agtctacagg
241 ttggctgcat agaagaaaaa ggtagagtta tttataatct tgtaaatctt ggactttgag
301 tcatctattt tcttttacag tcatcgaata cttttggaaa taaggtaata tatgcctttt
361 gagctgtctt gacgttcaca gatataaaat attaaatata ttttaatttt gtgcccttgc
421 agattgatca cttattcatt agtaatttac cagagattgt ggtggagtta ttgatgacgt
481 tacatgagcc agcaaattct agtgccagtc agagcactga cctctgtgac ttttcagggg
541 atttggatcc tgctcctaat ccacctcatt ttccatcgca tgtgattaaa gcaacatttg
601 cctatatcag caattgtcat aaaaccaagt taaaaagcat tttagaaatt ctttccaaaa
661 gccctgattc ctatcagaaa attcttcttg ccatatgtga gcaagcagct gaaacaaata
721 atgtttataa gaagcacaga attcttaaaa tatatcacct gtttgttagt ttattactga
781 aagatataaa aagtggctta ggaggagctt gggcctttgt tcttcgagac gttatttata
841 ctttgattca ctatatcaac caaaggtaaa taacatattt agaccaatat ataagcagtc
901 tttctatcct gttcttcctg tttttttgct ttgttttgtt ttgttttgag acgaagactc
961 actctgtccg cccaggctgg gtgcagtcac ggctcactgc atcctcaacc tcctgggttc
1021 agattatcct tcctcctcac cctgccgggt agctggggct acaggagcat accaccatgc
1081 ctgactaatt ttttgtgttt tttgtagagg tggggtttca ccatattgcc cagggtggtc
1141 tcaaactcct gggctcaagc gaactgtcag cctcagcctc ccagtgtgct gggattacag
1201 gcatgagcta ctatgcccaa cctatcctgt tcttttaatt gaaagtttat atgcttctaa
1261 gaggtagata ccagaatgtt gctttctgaa ttttgctttt taagatgtct attatattta
1321 cttattagtt tttaaaaatt gcgctacttg cctgggaaac atagcagacc tcgtttctac
1381 taaaaatttt ttaaaaaaga aaattagggc aaggtgtggt agctcacacc tataatccca
1441 gcactttggg aggttgaggt aggtagattg cttgagccca ggagttagag accagcctgg
1501 gcaacatgat gtgaaaaccc atctctacaa aaatttttaa aaaaataagc cagggattgt
1561 ggcatgcacc tgtagtctca cctactccgg aggctgaggt gggaggatgg cttgcgctca
1621 ggaggcagag gttacaggtt acagtgagca aagattgtgc cactacactc cagcctggga
1681 gacagagcga gactcttgtc tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//