LOCUS BC022289 1868 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens calsequestrin 1 (fast-twitch, skeletal muscle), mRNA (cDNA clone MGC:22462 IMAGE:4338020), complete cds. ACCESSION BC022289 VERSION BC022289.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1868) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1868) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 36 Row: e Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21536273. FEATURES Location/Qualifiers source 1..1868 /db_xref="H-InvDB:HIT000039451" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22462 IMAGE:4338020" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1868 /gene="CASQ1" /gene_synonym="PDIB1" /db_xref="GeneID:844" /db_xref="HGNC:HGNC:1512" /db_xref="MIM:114250" CDS 162..1334 /gene="CASQ1" /gene_synonym="PDIB1" /codon_start=1 /product="calsequestrin 1 (fast-twitch, skeletal muscle)" /protein_id="AAH22289.1" /db_xref="GeneID:844" /db_xref="HGNC:HGNC:1512" /db_xref="MIM:114250" /translation="MGPRAVPGLRLALLLLLVLGTPKSGVQGQEGLDFPEYDGVDRVI NVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGL VDSEKDAAVAKKLGLTEVDSMYVFKGDEVIEYDGEFSADTIVEFLLDVLEDPVELIEG ERELQAFENIEDEIKLIGYFKSKDSEHYKAFEDAAEEFHPYIPFFATFDSKVAKKLTL KLNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDG IHIVAFAEEADPDGFEFLETLKAVAQDNTENPDLSIIWIDPDDFPLLVPYWEKTFDID LSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTEDDDDDDDD" BASE COUNT 475 a 463 c 472 g 458 t ORIGIN 1 gccctctgtc cactgctctg ggccattccc caatcccccc tcccacttga gcccctaact 61 cagaatctgg gacccagggg cccctcccta ccccagctaa cctcttctgg accaggagag 121 ccaacccaga tcccactacc tccatgagtg ctacagacag gatggggccc agagctgtgc 181 cgggtctgcg gctggcactg ctgttgctgc tggtgctagg gacacccaag tcaggggtac 241 aggggcagga agggctggac ttccctgagt acgatggtgt ggaccgtgtg atcaatgtca 301 atgcaaagaa ctacaagaat gtgttcaaga agtatgaggt gctggcactc ctctaccatg 361 aaccccccga ggatgacaag gcctcacaaa gacaatttga gatggaggag ctgatcctgg 421 agttagcagc ccaagtccta gaagacaagg gtgttggctt cgggctggta gactctgaga 481 aggatgcagc tgtggccaag aaactaggcc taactgaagt ggacagcatg tatgtattca 541 agggagatga agtcattgag tacgatggcg agttttctgc tgacaccatc gtggagtttc 601 tgcttgatgt cctagaggac cctgtggaat tgattgaagg tgaacgagag ctgcaggcgt 661 ttgagaatat tgaggatgag atcaaactca ttggctactt caagagcaaa gactcagagc 721 attacaaagc cttcgaggat gcagctgagg agtttcatcc ctacatcccc ttcttcgcca 781 ccttcgacag caaggtggca aagaagctga ccctgaagct gaatgagatt gatttctacg 841 aggccttcat ggaagagcct gtgaccatcc cagacaagcc caatagcgaa gaggagattg 901 tcaacttcgt ggaggagcac aggagatcaa ccctgaggaa actgaagccg gagagtatgt 961 atgagacctg ggaggatgat atggatggaa tccacattgt ggccttcgca gaggaagctg 1021 atcctgatgg tttcgagttc ttagagactc tcaaggctgt ggcccaagat aacactgaaa 1081 acccagatct tagcatcatc tggattgacc ctgatgactt ccccctgctg gtcccatact 1141 gggagaagac gtttgacatc gacttgtcag ccccacaaat aggagtcgtc aatgttactg 1201 atgcggatag cgtatggatg gaaatggacg atgaggagga cctgccttct gctgaggagc 1261 tggaggactg gctggaggat gtcctggagg gcgagatcaa cacagaggac gatgacgatg 1321 atgatgatga ctagttgcta tggcaaccat ctttcagccc cactggtctt ttcatgctct 1381 ctcctgcctt cccttgtcct tccctgagtt cctccaggga gactaggtta ttctctgcca 1441 tagagctaac tggggtctat atgctgggtg ctgagacact gatccccctc atttgatgag 1501 caaatgagct acttttccct agacaccagg ccagctctct cttatctgac ttctgtttct 1561 tatcccataa cttacttgta tctattatgt gtctcttcca tcactctcca tactctttct 1621 tgtgattctc ctctagccat atatatgggc cccatctctg ttctgttccc tccatctatg 1681 cacagctttc ccccactctc tctaatcctg tatctttctg actgtcctgt ccttggccag 1741 aaggaaggga gaatactgtg tttgggactg tatctcagca atcacttgtt aatgtatttg 1801 ggtcaaatga gaggcctcaa taaagacatc tggggcacca aaaaaaaaaa aaaaaaaaaa 1861 aaaaaaaa //