LOCUS BC022284 1130 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens coiled-coil domain containing 6, mRNA (cDNA clone
IMAGE:4762273), partial cds.
ACCESSION BC022284
VERSION BC022284.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1130)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1130)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: j Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852389.
FEATURES Location/Qualifiers
source 1..1130
/db_xref="H-InvDB:HIT000090563"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4762273"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1130
/gene="CCDC6"
/gene_synonym="H4"
/gene_synonym="PTC"
/gene_synonym="TPC"
/db_xref="GeneID:8030"
/db_xref="HGNC:HGNC:18782"
/db_xref="MIM:601985"
CDS 127..>1130
/gene="CCDC6"
/gene_synonym="H4"
/gene_synonym="PTC"
/gene_synonym="TPC"
/codon_start=1
/product="CCDC6 protein"
/protein_id="AAH22284.1"
/db_xref="GeneID:8030"
/db_xref="HGNC:HGNC:18782"
/db_xref="MIM:601985"
/translation="MADSASESDTDGAGGNSSSSAAMQSSCSSTSGGGGGGGGGGGGG
KSGGIVISPFRLEELTNRLASLQQENKVLKIELETYKLKCKALQEENRDLRKASVTIQ
ARAEQEEEFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELE
QHLEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNRLW
KRMDKLEAEKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQL
RAAQLQHSEKMAQYLEEERHMREERGRRGKMAATKRKRRGGFAVQAKKPKKKKKKKKK
"
BASE COUNT 346 a 277 c 319 g 188 t
ORIGIN
1 gccctggtgc caggcgctca gctcggcgct cccctgtgct cgcccggcgc ccactcattc
61 gcagcccggc cttcgtcgcc gccgcctccc tgctgctcct cctcctttcc ccagcccgcc
121 gcggccatgg cggacagcgc cagcgagagc gacacggacg gggcgggggg caacagcagc
181 agctcggccg ccatgcagtc gtcctgctcg tcgacctcgg gcggcggcgg tggcggcggg
241 ggaggcggcg gcggtgggaa gtcggggggc attgtcatct cgccgttccg cctggaggag
301 ctcaccaacc gcctggcctc gctgcagcaa gagaacaagg tgctgaagat agagctggag
361 acctacaaac tgaagtgcaa ggcactgcag gaggagaacc gcgacctgcg caaagccagc
421 gtgaccatcc aagccagggc tgagcaggaa gaagaattca ttagtaacac tttattcaag
481 aaaattcagg ctttgcagaa ggagaaagaa acccttgctg taaattatga gaaagaagaa
541 gaattcctca ctaatgagct ctccagaaaa ttgatgcagt tgcagcatga gaaagccgaa
601 ctagaacagc atcttgaaca agagcaggaa tttcaggtca acaaactgat gaagaaaatt
661 aaaaaactgg agaatgacac catttctaag caacttacat tagaacagtt gagacgggag
721 aagattgacc ttgaaaatac attggaacaa gaacaagaag cactagttaa tcgcctctgg
781 aaaaggatgg ataagcttga agctgaaaag cgaatcctgc aggaaaaatt agaccagccc
841 gtctctgctc caccatcgcc tagagatatc tccatggaga ttgattctcc agaaaatatg
901 atgcgtcaca tcaggttttt aaagaatgaa gtggaacggc tgaagaagca actgagagct
961 gctcagttac agcattcaga gaaaatggca cagtatctgg aggaggaacg tcacatgaga
1021 gaagagcgcg ggcggcgagg caagatggcg gcaaccaaga ggaaacggcg tggaggcttt
1081 gcagttcagg cgaagaagcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//