LOCUS BC022279 1550 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD300c molecule, mRNA (cDNA clone MGC:22395
IMAGE:4692025), complete cds.
ACCESSION BC022279
VERSION BC022279.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1550)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1550)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314647.
FEATURES Location/Qualifiers
source 1..1550
/db_xref="H-InvDB:HIT000039446"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22395 IMAGE:4692025"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1550
/gene="CD300C"
/gene_synonym="CMRF-35A"
/gene_synonym="CMRF35"
/gene_synonym="CMRF35A"
/gene_synonym="CMRF35A1"
/gene_synonym="IGSF16"
/gene_synonym="LIR"
/db_xref="GeneID:10871"
/db_xref="HGNC:HGNC:19320"
/db_xref="MIM:606786"
CDS 362..1036
/gene="CD300C"
/gene_synonym="CMRF-35A"
/gene_synonym="CMRF35"
/gene_synonym="CMRF35A"
/gene_synonym="CMRF35A1"
/gene_synonym="IGSF16"
/gene_synonym="LIR"
/codon_start=1
/product="CD300c molecule"
/protein_id="AAH22279.1"
/db_xref="GeneID:10871"
/db_xref="HGNC:HGNC:19320"
/db_xref="MIM:606786"
/translation="MTARAWASWRSSALLLLLVPGYFPLSHPMTVAGPVGGSLSVQCR
YEKEHRTLNKFWCRPPQILRCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTE
EDAGTYWCGVDTPWLRDFHDPIVEVEVSVFPAGTTTASSPQSSMGTSGPPTKLPVHTW
PSVTRKDSPEPSPHPGSLFSNVRFLLLVLLELPLLLSMLGAVLWVNRPQRSSRSRQNW
PKGENQ"
BASE COUNT 343 a 479 c 413 g 315 t
ORIGIN
1 gaaatggccc agcttggctc tgccttctgc agtgtgagta acacactgaa gccagaagct
61 gtgggctgtg gggaagtggc tgcatcgcca cccaagggac cctggacttt gccagacgtc
121 agggttgaga ggagccacta gcaccatccc agagctgtca gcaccggcct cagcccaggc
181 ggctctctcc ctgagcttcc tgtaccctga ccctctccag cctcagacct gagacagggc
241 tggacaagga agcagagagc agaagaaaag cagaagcgaa gctcagatct gctgggagga
301 gactacattt tgtcccctcc tggggtcttg cacagtggca ggtgacattc gtgttacagg
361 aatgactgcc agggcctggg cctcgtggcg gtcttcagct ctgctcctcc tgcttgtccc
421 aggctatttt cctctgagcc accccatgac cgtggcgggc cccgtggggg gatccctgag
481 tgtgcagtgt cgctatgaga aggaacacag gaccctcaac aaattctggt gcagaccacc
541 acagattctc cgatgtgaca agattgtgga gaccaaaggg tcagcaggga aaaggaatgg
601 ccgagtgtcc atcagggaca gtcctgcaaa cctcagcttc acagtgaccc tggagaatct
661 cacagaggag gacgcaggca cctactggtg tggggtggat acaccgtggc tccgagactt
721 tcatgatccc attgtcgagg ttgaggtgtc cgtgttcccg gccgggacga ccacagcctc
781 cagcccccag agctccatgg gcacctcagg tcctcccacg aagctgcccg tgcacacctg
841 gcccagcgtg accagaaagg acagccccga acccagccca caccctggct ccctgttcag
901 caatgtccgc ttcctgctcc tggtcctctt ggagctgccc ctgctcctga gcatgctggg
961 tgccgtcctc tgggtgaaca gacctcagag aagctctaga agcaggcaga attggcccaa
1021 gggtgagaac cagtagcatc tgctgtccat caaggccctg tgctgcaaca gagcccctct
1081 gggggactgg aatgacctcc tgaccactcc ctcccgggct gctctctcca catctcctgg
1141 aatcctttgt gagcctcctt cagccttttc cctgtgcccg atcctcatgt gtcacatgtg
1201 aacctgacgg acatggacgc cctgagctgt gagtccacgt ctcatgtgca cgccccggcc
1261 agctaagcct cgggccgtca gcaatacctc tgagtgcccg gatgccctcc ctgcaccctt
1321 ccatttctcc aggagcctgg cactgcttcc tccaccgttt tcacagggag aagcaggtct
1381 aggactcccc tgcacctttg ccaccataat ggcccacact ccctgggtcc aggagtgtag
1441 aatatgcggc tgcttccatt tgctgagtgt gtcgattcaa tgatgctttc aaactttaat
1501 aaatgacaat gtgtaggcca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//