LOCUS BC022264 2684 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear factor I/A, mRNA (cDNA clone MGC:22317
IMAGE:4270934), complete cds.
ACCESSION BC022264
VERSION BC022264.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2684)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2684)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30840979.
FEATURES Location/Qualifiers
source 1..2684
/db_xref="H-InvDB:HIT000039437"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22317 IMAGE:4270934"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2684
/gene="NFIA"
/gene_synonym="KIAA1439"
/gene_synonym="NFI-L"
/db_xref="GeneID:4774"
/db_xref="HGNC:HGNC:7784"
/db_xref="MIM:600727"
CDS 172..1668
/gene="NFIA"
/gene_synonym="KIAA1439"
/gene_synonym="NFI-L"
/codon_start=1
/product="nuclear factor I/A"
/protein_id="AAH22264.1"
/db_xref="GeneID:4774"
/db_xref="HGNC:HGNC:7784"
/db_xref="MIM:600727"
/translation="MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKH
EKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPC
CVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPG
LCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFV
TSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTK
RLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSP
SPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHP
QETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP
LPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDPFSTL"
BASE COUNT 773 a 666 c 551 g 694 t
ORIGIN
1 gtcttggaaa tgtgaacgca agaagcaggc ttgatttttt tttctccccc cttctctctc
61 tctctctctc tctctcttcc tctctccctc tttctcctct ctcacccaca ctcacgcaca
121 cctccaaacc gcacacccag acgcacacgc ataccccagc gcccggcagt tatgtattct
181 ccgctctgtc tcacccagga tgaatttcat cctttcatcg aagcacttct gccccacgtc
241 cgagcctttg cctacacatg gttcaacctg caggcccgaa aacgaaaata cttcaaaaaa
301 catgaaaagc gtatgtcaaa agaagaagag agagccgtga aggatgaatt gctaagtgaa
361 aaaccagagg tcaagcagaa gtgggcatct cgacttctgg caaagttgcg gaaagatatc
421 cgacccgaat atcgagagga ttttgttctt acagttacag ggaaaaaacc tccatgttgt
481 gttctttcca acccagacca gaaaggcaag atgcgaagaa ttgactgcct ccgccaggca
541 gataaagtct ggaggttgga ccttgttatg gtgattttgt ttaaaggtat tccgctggaa
601 agtactgatg gcgagcgcct tgtaaagtcc ccacaatgct ctaatccagg gctctgtgtc
661 caaccccatc acataggggt ttctgttaag gaactcgatt tatatttggc atactttgtg
721 catgcagcag attcaagtca atctgaaagt cccagccagc caagtgacgc tgacattaag
781 gaccagccag aaaatggaca tttgggcttc caggacagtt ttgtcacatc aggtgttttt
841 agtgtcactg agctagtaag agtgtcacag acaccaatag ctgcaggaac tggcccaaat
901 ttttctctct cagatttgga aagttcttca tactacagca tgagtccagg agcaatgagg
961 aggtctttac ccagcacatc ctctacgagc tccacaaagc gcctcaagtc tgtggaggat
1021 gaaatggaca gtcctggtga ggagccattt tatacaggcc aagggcgctc cccaggaagt
1081 ggcagtcagt caagtggatg gcatgaagtg gagccaggaa tgccatctcc aaccacactg
1141 aagaagtcgg agaagtctgg tttcagcagc ccctcccctt cacagacctc ctccctggga
1201 acggcgttca cacagcatca ccgacctgtc attacaggac ccagagcaag tccgcatgca
1261 acaccatcga ctcttcattt cccgacatca cccattatcc agcagcctgg gccttacttc
1321 tcacacccag ccatccgcta tcaccctcag gagacgctga aagaatttgt ccaacttgtc
1381 tgccctgatg ctggtcagca ggctggacag gtggggttcc tcaatcccaa tgggagcagc
1441 caaggcaagg tgcacaaccc attccttccc accccaatgt tgccaccgcc accgccacca
1501 ccgatggcca ggcctgtgcc tctgccggtg ccagacacaa agcctccaac cacgtcaaca
1561 gaaggaggtg cagcctcccc cacgtcacca atcctggtac ctgggataaa agttgcagcg
1621 tcccaccatc caccagacag accacctgac cccttctcaa ctctgtaaca tggacgcaac
1681 ctcaacccag cgcagttaca acttcactat cagcggaagg ggagaaaaac cgattcaaat
1741 caacttgtac atggaaacag caagcattat ggtcaaacag caaaggccat aaccttttgg
1801 gatttttttt tttttttaaa tactttaggg actgttgtaa tttctcatat ggtgctggaa
1861 atggttgggc tttgtaacat ttgaagtgtt tccatggtag cgtgagcatt aggtgacgtg
1921 gctagcggag gactaccctt gctcactgac ttcctgttgt aacacacttt ccttacggag
1981 cctggctgtt tcacagtatt tcatgaattt acccacacag gtgtgatcct ccttgagcat
2041 tgaggaggca catggagaac taaatctttt gtagtagctg agatctgcaa tatataacgg
2101 gacagtcaaa gggcaatgtt tttctgtaac atattggaaa aagaaaatgc agttatattc
2161 cttttttatt tgttccttta gtttgttttg gttcagcagt cagcagttaa gtatataaca
2221 tggcccgcaa ggacaatgaa tccactcaca ttgcagaaca attccgaaaa tggcaaacta
2281 ctactactac tgttcagttt tttaaaagtt ttgaaatgct gcacttacat ttaaaaaaac
2341 aacaacaaca ttttttcaac aatttcaaca atgacacaaa aattcacatg gaaatgggga
2401 agatggtctg ttttgacaga aactgacagg aatcaatcaa aacaatcgaa ttttgaattg
2461 agtaaagtgc aatttcattg gatagctaaa tatctttgta agatagagat tgttgaaaat
2521 tctatttttg tttttctagt cctttcaccc caggactcta aattattggg gtaaaaaaca
2581 gccttgcaag aaaaagggga gctatttttg ctttttatgt tttttattgt taaacttgta
2641 tccctttaaa aactaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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