LOCUS BC022200 1734 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens TRIO and F-actin binding protein, mRNA (cDNA clone
IMAGE:3356367).
ACCESSION BC022200
VERSION BC022200.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1734)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein
This clone has the following problem: no cloning site /
microdeletion.
FEATURES Location/Qualifiers
source 1..1734
/db_xref="H-InvDB:HIT000090532"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3356367"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 387 a 506 c 550 g 291 t
ORIGIN
1 gggcggatgg aaggggccgg ggcagcgtcg gggaaaggaa gggccggagg cgcggcggcg
61 ggcggccgag aggggcggcg gcggcggcgg cggcggggtt cccgcgccgc ggagcccggc
121 ccgagagccg cgtccacgtt cctgcctcct gctcccgccg ccctggggcg ccgccatgac
181 gcccgatctg ctcaacttca agaagggatg gatgtcgatc ttggacgagc ctggagagcc
241 tccctccccc tcgctcacca ccacctctac ttcgcagtgg aagaaacatt ggtttgtgct
301 gacagattca agtctcaaat attacagaga ctccactgct gaggaggcag atgagctgga
361 tggtgagatc gacctgcgtt cctgcacgga tgtcactgag tacgcggtac agcgcaacta
421 tggcttccag atccacacca aggatgctgt ctataccttg tcggccatga cctcaggcat
481 ccggcggaac tggatcgagg ctctgagaaa gaccgtacgt ccaacttcag ccccagatgt
541 caccaagctc tcggactcta acaaggagaa cgcgctgcac agctacagca cccagaaggg
601 ccccctgaag gcaggggagc agcgggcggg ctctgaggtc atcagccggg gtggccctcg
661 gaaggcggac gggcagcgtc aggccttgga ctacgtggag ctctcgccgc tgacccaggc
721 ttccccgcag cgggcccgca ccccagcccg cactcctgac cgcctggcca agcaggagga
781 gctggagcgg gacctggccc agcgctccga ggagcggcgc aagtggtttg aggccacaga
841 cagcaggacc ccagaggtgc ctgctggtga ggggccgcgc cggggcctgg gtgcccccct
901 gactgaggac cagcaaaacc ggcttagtga ggagatcgag aagaagtggc aggagctgga
961 gaagctgccc ctgcgggaga ataagcgggt gcccctcact gccctgctca accaaagccg
1021 cggagagcgc cgagggcccc caagtgacgg ccacgaggca ctggagaagg aggttcaggc
1081 tcttcgggcc cagctggagg cgtggcgtct ccaaggggag gctcctcaga gtgcactgag
1141 atcccaggag gatggccaca tccccccggg ctacatctca cagctggtgg gcgtgatcac
1201 tgtgcccgtt ttacagacaa ggccactgag ctctgagagg ttatgtgact tgcccaaggt
1261 caccccgcct gcaggtctca aaggtgggat ttgagcgagg gtccggctga ctgcagagcc
1321 tgtgtgtgag tccccgtgtg acactctgca cttggaccct tgccccgggg aagtgggggg
1381 ctagtggccc cgagagtcac tccctgaaca cagggaaatc ctgccgaggc ccactgggcc
1441 aaggccccac acaaggaggt ctgcaggaca ggggagcctc cagtagccct cagagaatgc
1501 accgtccgcc taggacagcg gttctcaacg gggtccattt tgtccccctt ggggacattt
1561 ggctgtgtct gggaatactt ctggttgtca caactaggac aaactaactc tctagaaaaa
1621 acgtgtgtgt gtacacatat ataagtttat tataaatttt accaataaaa acaatgctta
1681 gtacacaatt tacaaataaa aatatataat tttaaaaaaa aaaaaaaaaa aaaa
//