LOCUS BC022098 919 bp mRNA linear HUM 19-NOV-2003
DEFINITION Homo sapiens cDNA clone MGC:31944 IMAGE:4878869, complete cds.
ACCESSION BC022098
VERSION BC022098.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 919)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 919)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..919
/db_xref="H-InvDB:HIT000039403"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31944 IMAGE:4878869"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
CDS 33..746
/codon_start=1
/product="Unknown (protein for MGC:31944)"
/protein_id="AAH22098.1"
/translation="MAWSPLLLTLLAHCTGSWAQSVLTQPPSVSGAPGQRVTISCTGS
SSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAE
DEADYYCQSYDYSLSASGVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCL
ISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSC
QVTHEGSTVEKTVAPTECS"
misc_feature 117..425
/note="IGv; Region: Immunoglobulin domain variable region
(v) subfamily"
/db_xref="CDD:cd00099"
misc_feature 441..725
/note="IGc; Region: Immunoglobulin domain constant region
subfamily"
/db_xref="CDD:cd00098"
BASE COUNT 235 a 295 c 225 g 164 t
ORIGIN
1 cacaagaggc agcactcagg acaatctcca gcatggcctg gtctcctctc ctcctcactc
61 tcctcgctca ctgcacaggg tcctgggccc agtctgtgct gacgcagccg ccctcagtgt
121 ctggggcccc agggcagagg gtcaccatct cctgcactgg gagcagttcc aacatcgggg
181 caggttatga tgtacactgg taccagcagc ttccaggaac agcccccaaa ctcctcatct
241 atggtaacag caatcggccc tcaggggtcc ctgaccgatt ctctggctcc aagtctggca
301 cctcagcctc cctggccatc actgggctcc aggctgagga tgaggctgat tattactgcc
361 aatcctatga ctacagcctg agtgcttcgg gggtgttcgg cggagggacc aagctgaccg
421 tcctaggtca gcccaaggct gccccctcgg tcactctgtt cccgccctcc tctgaggagc
481 ttcaagccaa caaggccaca ctggtgtgtc tcataagtga cttctacccg ggagccgtga
541 cagtggcctg gaaggcagat agcagccccg tcaaggcggg agtggagacc accacaccct
601 ccaaacaaag caacaacaag tacgcggcca gcagctacct gagcctgacg cctgagcagt
661 ggaagtccca cagaagctac agctgccagg tcacgcatga agggagcacc gtggagaaga
721 cagtggcccc tacagaatgt tcataggttc taaaccctca ccccccccac gggagactag
781 agctgcagga tcccagggga ggggtctctc ctcccacccc aaggcatcaa gcccttctcc
841 ctgcactcaa taaaccctca ataaatattc tcattgtcaa tcaaaaaaaa aaaaaaaaaa
901 aaaaaaaaaa aaaaaaaaa
//