LOCUS BC022028 1558 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens von Willebrand factor A domain containing 3B, mRNA
(cDNA clone IMAGE:4826185), complete cds.
ACCESSION BC022028
VERSION BC022028.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1558)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1558)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC022028.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: n Column: 24
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1558
/db_xref="H-InvDB:HIT000039360"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4826185"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1558
/gene="VWA3B"
/db_xref="GeneID:200403"
/db_xref="HGNC:HGNC:28385"
CDS 129..1379
/gene="VWA3B"
/codon_start=1
/product="VWA3B protein"
/protein_id="AAH22028.1"
/db_xref="GeneID:200403"
/db_xref="HGNC:HGNC:28385"
/translation="MATKGMRLKSTKEVFPLAHVCNDTNKMTLINPQGAKLNIYKRKV
EQAIQSYEKRLNKIVWRALSQEEKEKLDANKPIQYLENKTVLNQALERLNWPISLKEL
SMLESEILAGKMYIQQAMELQEAAKKNYANKAPGEQQKLQGNPTKKTKSKRPDPLKGQ
KVIARCDENGFYFPGVVKKCVSRTQALVGFSYGDTKVVSTSFITPVGGAMPCPLLQVG
DYVFAKIVIPKGFDFYVPAIVIALPNKHVATEKFYTVLKCNNRREFCPRSALIKISQN
KYALSCSHIKSPPIPEGPEVEDVEARNSAFLFWPLKEADTQDSREPRREKPRRKKRPA
KQPLQQAAPSDSDGSSHGISSHGSCQGTHPEPKTAHLHFPAAGRLGLSSHAIIATPPP
RAALPCTLQATHSSKGLRSVPETL"
BASE COUNT 481 a 400 c 370 g 307 t
ORIGIN
1 gtaaaaacta agatgtcaga ctcgaagtgt ggggtatgac tttatctttc cctggatctg
61 catgtggaga ggacggagag tgggtgcaca caagccaaat ctgagctact atcacactga
121 agcacacaat ggccacgaaa ggcatgaggt tgaaatccac aaaagaggtg ttccctctgg
181 cacatgtgtg caacgacaca aataagatga cattaattaa cccccaagga gccaaactca
241 atatctacaa gcgaaaagtg gaacaggcaa ttcaatccta tgaaaagcgc ttgaataaaa
301 ttgtttggcg agcattatct caagaggaaa aagaaaagtt agatgcaaac aaaccaatac
361 agtacttgga aaacaaaaca gttttaaacc aggctttaga acggttgaat tggcccattt
421 cactgaaaga gctgtcgatg ctggaaagtg aaatcctagc tgggaaaatg tacatccagc
481 aggccatgga actccaggag gctgccaaga agaattatgc aaacaaggcc ccgggagagc
541 aacagaaatt gcaaggaaat ccaacaaaga aaaccaaatc aaaaagacca gatcccctca
601 aaggacagaa ggttattgca agatgcgatg aaaatggctt ttattttcca ggggttgtga
661 agaagtgtgt gagccgcacc caagcactgg tgggcttcag ttacggagac accaaggtcg
721 tgtccacctc cttcatcacg cctgtggggg gcgccatgcc ctgcccgctg ctccaggttg
781 gagattatgt gtttgccaaa attgtgatac ccaaaggatt tgacttctat gtccctgcca
841 ttgtcatagc acttcccaat aagcatgtgg ccacagaaaa attctacaca gttttgaagt
901 gtaacaaccg gagagaattt tgccctcgga gtgcacttat taagatcagc caaaacaagt
961 atgcgctctc ttgctctcat ataaagtcac ccccaattcc tgagggtcca gaagtagagg
1021 atgtggaggc gaggaactct gctttcctct tctggccact gaaagaagcg gacacgcagg
1081 attccagaga gccaagacga gagaagccca ggaggaaaaa gaggcccgcc aagcagccac
1141 tccagcaggc ggcgccctcg gactcggacg gctcctccca cggcatcagc tcccatgggt
1201 cctgccaggg gacacacccc gagcccaaga cagcccacct ccacttcccc gcggccgggc
1261 gtctaggact cagcagccac gccatcattg ccacacctcc acctcgagca gccctgccct
1321 gtactctcca agccacccac agcagcaaag ggctgaggag cgtccctgag acactttaag
1381 gccgtctggt ggcagctatg tttaagagac cagcgtcctt ccaggctgtt cagacctcag
1441 cgttgacact gaaactggcc cctccgcgga gtctgttgta ggtaactcta attgagcccg
1501 aaaccagaat aaaaactctt acattggaaa catttcaaaa ccaaaaaaaa aaaaaaaa
//