LOCUS BC022008 2857 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens preferentially expressed antigen in melanoma, mRNA (cDNA clone MGC:26279 IMAGE:4825127), complete cds. ACCESSION BC022008 VERSION BC022008.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2857) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2857) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: k Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46249365. FEATURES Location/Qualifiers source 1..2857 /db_xref="H-InvDB:HIT000090502" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26279 IMAGE:4825127" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2857 /gene="PRAME" /gene_synonym="OIP4" /db_xref="GeneID:23532" /db_xref="HGNC:HGNC:9336" /db_xref="MIM:606021" CDS 947..2476 /gene="PRAME" /gene_synonym="OIP4" /codon_start=1 /product="preferentially expressed antigen in melanoma" /protein_id="AAH22008.1" /db_xref="GeneID:23532" /db_xref="HGNC:HGNC:9336" /db_xref="MIM:606021" /translation="MERRRLWGSIQSRYISMSVWTSPRRLVELAGQSLLKDEALAIAA LELLPRELFPPLFMAAFDGRHSQTLKAMVQAWPFTCLPLGVLMKGQHLHLETFKAVLD GLDVLLAQEVRPRRWKLQVLDLRKNSHQDFWTVWSGNRASLYSFPEPEAAQPMTKKRK VDGLSTEAEQPFIPVEVLVDLFLKEGACDELFSYLIEKVKRKKNVLRLCCKKLKIFAM PMQDIKMILKMVQLDSIEDLEVTCTWKLPTLAKFSPYLGQMINLRRLLLSHIHASSYI SPEKEEQYIAQFTSQFLSLQCLQALYVDSLFFLRGRLDQLLRHVMNPLETLSITNCRL SEGDVMHLSQSPSVSQLSVLSLSGVMLTDVSPEPLQALLERASATLQDLVFDECGITD DQLLALLPSLSHCSQLTTLSFYGNSISISALQSLLQHLIGLSNLTHVLYPVPLESYED IHGTLHLERLAYLHARLRELLCELGRPSMVWLSANPCPHCGDRTFYDPEPILCPCFMP N" BASE COUNT 657 a 731 c 793 g 676 t ORIGIN 1 gtcgagagcg gagagggcct gggaggaagt gggttttgca tacagtccct gttgactcta 61 gtgccccctg ctggccccag acgcgagttc cggcgaggct tcagggtaca gctcccccgc 121 agccagaagc cgggcctgca gcgcctcagc accgctccgg gacaccccac ccgcttccca 181 ggcgtgacct gtcaacagca acttcgcggt gtggtgaact ctctgaggaa aaacgtaagt 241 tcgagccctg attcctccgc ttccccgcag ggtgaccttg ggcttgtgcc cccagcacca 301 cccctgtccc gggtccctgt tttctctctg gaaatgggtt gaagaccaaa gaaaataatg 361 tgcgccactt gggtcacccc gggccgcctg ccccggaaaa ttggccccag ttgaggagtt 421 gtggctgtaa ggatgccttg aaccgaggcg gcggtgctcg tggttggagc tctccagggt 481 gggtgcgcat ttgtaatgcg gtggatgctc tgggactcgg cccctctgaa ggtgctgggg 541 gttggggacg gcccaggcag tggcgtaggc gtcctaggaa ggcgggagca gaggcagaaa 601 tgtcgctgca agaccgtagt cagggtcctt gaccacaggg gtcacttgtg accaaccaca 661 tggtctgttg ttcctcctgc cccctggttc agcccaggaa acactggtgc tcaggtttgg 721 agccagagat ttgcactgaa agggcgggat tgagtcgcca gttgtcagtt tcctcagcag 781 tatttgcgga ggttttcaca ggaggccgtt gcttcgtaaa tattatacat gtattcttct 841 ttttggagca ttttgattat tactctcaga cgtgcgtggc aacaagtgac tgagacctag 901 aaatccaagc gttggaggtc ctgaggccag cctaagtcgc ttcaaaatgg aacgaaggcg 961 tttgtggggt tccattcaga gccgatacat cagcatgagt gtgtggacaa gcccacggag 1021 acttgtggag ctggcagggc agagcctgct gaaggatgag gccctggcca ttgccgccct 1081 ggagttgctg cccagggagc tcttcccgcc actcttcatg gcagcctttg acgggagaca 1141 cagccagacc ctgaaggcaa tggtgcaggc ctggcccttc acctgcctcc ctctgggagt 1201 gctgatgaag ggacaacatc ttcacctgga gaccttcaaa gctgtgcttg atggacttga 1261 tgtgctcctt gcccaggagg ttcgccccag gaggtggaaa cttcaagtgc tggatttacg 1321 gaagaactct catcaggact tctggactgt atggtctgga aacagggcca gtctgtactc 1381 atttccagag ccagaagcag ctcagcccat gacaaagaag cgaaaagtag atggtttgag 1441 cacagaggca gagcagccct tcattccagt agaggtgctc gtagacctgt tcctcaagga 1501 aggtgcctgt gatgaattgt tctcctacct cattgagaaa gtgaagcgaa agaaaaatgt 1561 actacgcctg tgctgtaaga agctgaagat ttttgcaatg cccatgcagg atatcaagat 1621 gatcctgaaa atggtgcagc tggactctat tgaagatttg gaagtgactt gtacctggaa 1681 gctacccacc ttggcgaaat tttctcctta cctgggccag atgattaatc tgcgtagact 1741 cctcctctcc cacatccatg catcttccta catttccccg gagaaggaag agcagtatat 1801 cgcccagttc acctctcagt tcctcagtct gcagtgcctg caggctctct atgtggactc 1861 tttatttttc cttagaggcc gcctggatca gttgctcagg cacgtgatga accccttgga 1921 aaccctctca ataactaact gccggctttc ggaaggggat gtgatgcatc tgtcccagag 1981 tcccagcgtc agtcagctaa gtgtcctgag tctaagtggg gtcatgctga ccgatgtaag 2041 tcccgagccc ctccaagctc tgctggagag agcctctgcc accctccagg acctggtctt 2101 tgatgagtgt gggatcacgg atgatcagct ccttgccctc ctgccttccc tgagccactg 2161 ctcccagctt acgaccttaa gcttctacgg gaattccatc tccatatctg ccctgcagag 2221 tctcctgcag cacctcatcg ggctgagcaa tctgacccac gtgctgtatc ctgtccccct 2281 ggagagttat gaggacatcc atggtaccct ccacctggag aggcttgcct atctgcatgc 2341 caggctcagg gagttgctgt gtgagttggg gcggcccagc atggtctggc ttagtgccaa 2401 cccctgtcct cactgtgggg acagaacctt ctatgacccg gagcccatcc tgtgcccctg 2461 tttcatgcct aattagctgg gtgcacatat caaatgcttc attctgcata cttggacact 2521 aaagccagga tgtgcatgca tcttgaagca acaaagcagc cacagtttca gacaaatgtt 2581 cagtgtgagt gaggaaaaca tgttcagtga ggaaaaaaca ttcagacaaa tgttcagtga 2641 ggaaaaaaag gggaagttgg gggtaggcag atgttgactt gaggagttaa tgtgatcttt 2701 ggggagatac atcttataga gttagaaata gaatctgaat ttctaaaggg agattctggc 2761 ttgggaagta catgtaggag ttaatccctg tgtagactgt tgtaaagaaa ctgttgaaaa 2821 taaagagaag caatgtgaag caaaaaaaaa aaaaaaa //