LOCUS BC022003 1982 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens myotubularin related protein 9, mRNA (cDNA clone
MGC:26187 IMAGE:4825583), complete cds.
ACCESSION BC022003
VERSION BC022003.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1982)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1982)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: l Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33598962.
FEATURES Location/Qualifiers
source 1..1982
/db_xref="H-InvDB:HIT000039342"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26187 IMAGE:4825583"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1982
/gene="MTMR9"
/gene_synonym="DKFZp434K171"
/gene_synonym="LIP-STYX"
/db_xref="GeneID:66036"
/db_xref="HGNC:HGNC:14596"
/db_xref="MIM:606260"
CDS 42..1691
/gene="MTMR9"
/gene_synonym="DKFZp434K171"
/gene_synonym="LIP-STYX"
/codon_start=1
/product="myotubularin related protein 9"
/protein_id="AAH22003.1"
/db_xref="GeneID:66036"
/db_xref="HGNC:HGNC:14596"
/db_xref="MIM:606260"
/translation="MEFAELIKTPRVDNVVLHRPFYPAVEGTLCLTGHHLILSSRQDN
TEELWLLHSNIDAIDKRFVGSLGTIIIKCKDFRIIQLDIPGMEECLNIASSIEALSTL
DSITLMYPFFYRPMFEVIEDGWHSFLPEQEFELYSSATSEWRLSYVNKEFAVCPSYPP
IVTVPKSIDDEALRKVATFRHGGRFPVLSYYHKKNGMVIMRSGQPLTGTNGRRCKEDE
KLINATLRAGKRGYIIDTRSLNVAQQTRAKGGGFEQEAHYPQWRRIHKSIERYHILQE
SLIKLVEACNDQTHNMDRWLSKLEASNWLTHIKEILTTACLAAQCIDREGASILIHGT
EGTDSTLQVTSLAQIILEPRSRTIRGFEALIEREWLQAGHPFQQRCALSAYCNTKQKW
EAPVFLLFLDCVWQILRQFPCSFEFNENFLIMLFEHAYASQFGTFLGNNESERCKLKL
QQKTMSLWSWVNQPSELSKFTNPLFEANNLVIWPSVAPQSLPLWEGIFLRWNRSSKYL
DEAYEEMVNIIEYNKELQAKVNILRRQLAELETEDGMQESP"
BASE COUNT 525 a 457 c 482 g 518 t
ORIGIN
1 agcgtggggc tcggttccct ggctccggcc gcggggggag catggagttt gcggagctga
61 ttaagacccc gcgggtggac aatgtggtgc tgcaccggcc tttctacccg gctgtcgagg
121 gcaccctgtg cctgacgggc caccacttga tcctgtcctc ccggcaggac aatacggagg
181 agctgtggct cctccattca aacatcgacg ccatcgacaa gcgatttgta ggatcactgg
241 gtaccatcat cataaaatgt aaagattttc gaattattca gttggatatt cctggaatgg
301 aggaatgctt gaatatagcc agttccattg aggcattgtc tactctggac tccatcactc
361 tgatgtaccc tttcttttac cgtcctatgt ttgaagtgat agaagatggc tggcattcct
421 tccttcctga gcaagaattt gaactctatt cttcagctac cagtgaatgg aggctaagct
481 atgtcaataa ggaatttgct gtctgtccct cttacccacc aattgtcaca gtgcccaaat
541 ccatcgatga tgaagctctt cggaaggtag ctacatttcg acatggaggg cgcttcccag
601 tactcagcta ttaccacaaa aaaaatggga tggtaattat gcgaagtggt cagccactca
661 ctggtacaaa cgggaggagg tgcaaggagg acgagaagct gataaatgct accctcaggg
721 ctggaaagcg tggctacatc attgacaccc gatccctgaa cgtggctcag caaactagag
781 ccaaaggagg tggctttgaa caagaagctc attatcctca gtggaggcga attcataagt
841 ccattgagag gtatcacatt cttcaggaga gcttaatcaa acttgtggaa gcttgtaatg
901 accaaacaca taacatggac cgatggctca gtaaattgga ggcctctaac tggctgactc
961 acatcaaaga gattctgaca actgcctgcc tagcggctca gtgcatcgac agggaaggag
1021 catcaatatt gattcacgga acagaaggaa ctgattccac actccaggtg acctccttgg
1081 cccagatcat cttagagcca agaagcagga ccattcgtgg ttttgaggcc ctgattgaaa
1141 gagagtggct gcaggctggt cacccattcc agcagcgctg tgcactgtca gcctactgta
1201 acaccaagca gaagtgggag gctcctgtat ttcttctctt cttggactgc gtgtggcaga
1261 tccttcgtca gtttccctgt tcttttgagt ttaatgagaa tttcctcatc atgctctttg
1321 agcatgctta tgcctcacag tttggaacat ttctgggcaa caatgaaagt gaaagatgta
1381 agttgaagct acagcagaag acgatgtctt tgtggtcctg ggttaatcag cccagtgagc
1441 tgagtaaatt caccaatccc ctctttgaag ccaacaacct tgtcatctgg ccttcagttg
1501 ctccgcagag tcttccactg tgggaaggta ttttcctacg ttggaataga tcctctaagt
1561 atttggatga agcatatgaa gaaatggtta acatcattga atataataaa gaattacaag
1621 caaaagtcaa tatccttcga aggcagttgg cagaactgga aacagaggac gggatgcagg
1681 agagtccctg aaaggtctcc tcgcaccctt cgcaaggacc ttcttgggcc tgtgtccgcc
1741 gttctctcct tgtgcccttc agttcacttt tacacggtag ccttgaagtg aaggctttag
1801 atgtgggacc cccctaatgt aatggatttc tcaatactgt atgaataatg aaacttacta
1861 tcataaacca tgtttcatgt ggcctgttag ggcctgtcac tttgggagcc ggaaggaggt
1921 gctagtcatt ttatttttac gtgaaataga tgacctattt aatgccaaaa aaaaaaaaaa
1981 aa
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