LOCUS BC021998 818 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4), mRNA (cDNA clone IMAGE:2988668), partial cds. ACCESSION BC021998 VERSION BC021998.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 818) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 818) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC021998.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 3 Row: j Column: 21. FEATURES Location/Qualifiers source 1..818 /db_xref="H-InvDB:HIT000039339" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2988668" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..818 /gene="CDKN2A" /gene_synonym="ARF" /gene_synonym="CDK4I" /gene_synonym="CMM2" /gene_synonym="INK4" /gene_synonym="INK4a" /gene_synonym="MTS1" /gene_synonym="p14" /gene_synonym="p14ARF" /gene_synonym="p16" /gene_synonym="p16INK4" /gene_synonym="p16INK4a" /gene_synonym="p19" /gene_synonym="TP16" /db_xref="GeneID:1029" /db_xref="HGNC:HGNC:1787" /db_xref="MIM:600160" CDS <1..449 /gene="CDKN2A" /gene_synonym="ARF" /gene_synonym="CDK4I" /gene_synonym="CMM2" /gene_synonym="INK4" /gene_synonym="INK4a" /gene_synonym="MTS1" /gene_synonym="p14" /gene_synonym="p14ARF" /gene_synonym="p16" /gene_synonym="p16INK4" /gene_synonym="p16INK4a" /gene_synonym="p19" /gene_synonym="TP16" /codon_start=3 /product="CDKN2A protein" /protein_id="AAH21998.3" /db_xref="GeneID:1029" /db_xref="HGNC:HGNC:1787" /db_xref="MIM:600160" /translation="KGGAAAAELGPGGGENMVRRFLVTLRIRRACGPPRVRVFVVHIS WFTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQL RRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGRARCLGPSARGPG" BASE COUNT 177 a 243 c 247 g 151 t ORIGIN 1 caaagggcgg cgcagcggct gccgagctcg gccctggagg cggcgagaac atggtgcgca 61 ggttcttggt gaccctccgg attcggcgcg cgtgcggccc gccgcgagtg agggttttcg 121 tggttcacat ctcgtggttc acgggggagt gggcagcgcc aggggcgccc gccgctgtgg 181 ccctcgtgct gatgctactg aggagccagc gtctagggca gcagccgctt cctagaagac 241 caggtcatga tgatgggcag cgcccgagtg gcggagctgc tgctgctcca cggcgcggag 301 cccaactgcg ccgaccccgc cactctcacc cgacccgtgc acgacgctgc ccgggagggc 361 ttcctggaca cgctggtggt gctgcaccgg gccggggcgc ggctggacgt gcgcgatgcc 421 tggggccgtc tgcccgtgga cctggctgag gagctgggcc atcgcgatgt cgcacggtac 481 ctgcgcgcgg ctgcgggggg caccagaggc agtaaccatg cccgcataga tgccgcggaa 541 ggtccctcag acatccccga ttgaaagaac cagagaggct ctgagaaacc tccggaaact 601 tagatcatca gtcaccgaag gtcctacagg gccacaactg cccccgccac aacccacccc 661 gctttcgtag ttttcattta gaaaatagag cttttaaaaa tgtcctgcct tttaacgtag 721 atatatgcct tcccccacta ccgtaaatgt ccatttatat cattttttat atattcttat 781 aaaaatgtaa aaaagaaaaa aaaaaaaaaa aaaaaaaa //