LOCUS BC021819 1708 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens zinc finger protein 248, mRNA (cDNA clone IMAGE:4940056), complete cds. ACCESSION BC021819 VERSION BC021819.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1708) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1708) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (18-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: o Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32698747 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1708 /db_xref="H-InvDB:HIT000090469" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4940056" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1708 /gene="ZNF248" /gene_synonym="bA162G10.3" /db_xref="GeneID:57209" /db_xref="HGNC:HGNC:13041" CDS 395..730 /gene="ZNF248" /gene_synonym="bA162G10.3" /codon_start=1 /product="ZNF248 protein" /protein_id="AAH21819.1" /db_xref="GeneID:57209" /db_xref="HGNC:HGNC:13041" /translation="MNKSQEQVSFKDVCVDFTQEEWYLVDPAQKILYRDVILENYSNL VSVGYCITKPEVIFKIEQGEEPWILEKGFPSQCHPERKWKVDDVLESSQENEDDHFWE LLFHNNKTH" BASE COUNT 467 a 375 c 447 g 419 t ORIGIN 1 ccacgggaga ctcggttttc ctctctgtaa attacggata ttaggaatac ttgccgcctg 61 gggttgtttt gagcactttc attgtttagg tgctgtattt attgggtgtg cgttccctgg 121 gagagcccga gggagacggc tcctgcaccg gccccaaggg cctctctgcc cgtggagtgc 181 aggagcgaag gggctggcct agctgaccac cagggcccct gctggctctg accgccctcc 241 tatcccaagt aattatttac acgtttcgcg ttggcttatg tattatgtgt aatcatggca 301 cagtatcctg aagccgtcgg agtctgtgtg ctggtgcaag gtctgggaca aatttaagaa 361 gagagagctc tccttcctcc actaagagcg gaaaatgaac aaatcccagg aacaagtgtc 421 attcaaggat gtatgtgtgg acttcactca ggaagagtgg tatctggtgg accctgctca 481 gaagattcta tacagagatg tgatcctgga aaattatagc aatcttgtct cagtagggta 541 ttgcattact aaaccagaag tgatctttaa gatcgagcaa ggagaagagc cctggatatt 601 agaaaaagga ttcccaagcc agtgccaccc agaaaggaaa tggaaagttg atgacgtgtt 661 agagagcagc caggaaaatg aagatgacca tttttgggag cttctattcc acaacaacaa 721 aacacattga gaactgatgt gccttcacag gaaacttggc ccgtgtgttt ccaggattct 781 tgatgtttct tctgagctcc agggtcaggc agtatgattg aagtttctaa gccagcatcc 841 ttggaataaa gtagcttttg aggtaataag gagtagtccc taagaaccca cgtggaaggt 901 cacacttctg atctgagacc tttcagcaga gcctcagagc agagtggaaa aggccaggaa 961 agagcatgtc tggaactgcc tgttcactga agacattctt ggcactcctg tacagttaaa 1021 taacacttgg tgatgtcagc acatgcagaa accatggcag actgtccagt ggatgggctt 1081 tcaggaagaa ttaggctgcc agcatgagca aggggcaggc agcacaggag aggacacgtc 1141 actgcccact gtgaggactg tgaggacaca gtctggggaa ggcatcgcct agatggggaa 1201 cttgtccctg tgctcctcca taagcctgct cccttcctgt ctactcactg tctttgcagc 1261 ctgtggagat gcatcattgt tcctattctg atgttacaaa aatcaagtga cagtgttgta 1321 taaaggtcaa aaaatgggcc tagaaaatgt gacttattta atcatttcat ttgttagtgg 1381 catactcaga aaataactaa ttagggctga gctcggtggc tcatgcctgt aatcccagca 1441 ctctgggagg ccgacatggg aggactgctt gaatccagga attcaagacc agcttgggca 1501 acatagtgag acccggtctc tacaaaaaaa aagtatctgg ctgtggtggt gcgcacttgt 1561 agttctccta cttaggaggc cgagactgga ggattacttg agcttcagcc caggagttca 1621 aggctgcagt gagctgtgaa tcataccact gtggtacagc ccaaggcaac agagccagac 1681 cctgtctcaa aacaaaaaaa aaaaaaaa //