LOCUS BC021706 1378 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens heat shock transcription factor family, X linked 1,
mRNA (cDNA clone MGC:26102 IMAGE:4825659), complete cds.
ACCESSION BC021706
VERSION BC021706.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC021706.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: l Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706602.
FEATURES Location/Qualifiers
source 1..1378
/db_xref="H-InvDB:HIT000039256_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26102 IMAGE:4825659"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1378
/gene="HSFX1"
/gene_synonym="LW-1"
/db_xref="GeneID:51402"
/db_xref="HGNC:HGNC:29603"
CDS 20..1291
/gene="HSFX1"
/gene_synonym="LW-1"
/codon_start=1
/product="heat shock transcription factor family, X linked
1"
/protein_id="AAH21706.1"
/db_xref="GeneID:51402"
/db_xref="HGNC:HGNC:29603"
/translation="MEDKRSLSMARCEERNSRGQDHGLERVPFPPQLQSETYLHPADP
SPAWDDPGSTGSPNLRLLTEEIAFQPLAEEASFRRPHPDGDVPPQGEDNLLSLPFPQK
LWRLVSSNQFSSIWWDDSGACRVINQKLFEKEILKRDVAHKVFATTSIKSFFRQLNLY
GFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPYFQRDSPHLLVRMKRRVGVKSAP
RHQEEDKPEAAGSCLAPADTEQQDHTSPNENDQVTPQHREPAGPNTQIRSGSAPPATP
VMVPDSAVASDNSPVTQPAGEWSEGSQAHVTPVAAVPGPAALPFLYVPGSPTQMNSYG
PVVALPTASRSTLAMDTTGLPAPGMLPFCHLWVPVTLVAAGAAQPAASMVMFPHLPAL
HHHCPHSHRTSQYMPASDGPQAYPDYADQST"
BASE COUNT 334 a 413 c 348 g 283 t
ORIGIN
1 gggctagcaa gtttgccaga tggaggacaa gcgatcattg agtatggctc gctgtgaaga
61 aagaaattcg aggggacagg atcatggctt ggaaagggtg cctttccctc cccagttgca
121 gtcagagacc taccttcacc cagcagatcc ttcccctgcc tgggacgacc cggggtccac
181 tgggagccct aacttgaggc tgctgacaga agaaatcgct ttccaacctc tggccgagga
241 agcttcgttc agaaggccgc accctgacgg tgacgtcccg ccccagggag aagataatct
301 cctctccctc ccctttccac agaaactgtg gagactggtc agcagcaacc agttttcgtc
361 catctggtgg gatgacagtg gggcttgtag agtgatcaat caaaaactct ttgaaaagga
421 gattctcaaa agggacgtcg cacacaaagt gtttgccaca acttcgataa agagcttctt
481 ccgccagcta aacttgtatg gcttccgaaa acggcgtcaa tgcactttca ggaccttcac
541 ccgcattttc tccgcaaaaa ggctggtctc catcttgaat aagttagagt tctactgcca
601 tccttacttt caaagagact cccctcacct cctcgtgagg atgaagagaa gagtgggtgt
661 caagtctgca ccaagacatc aggaggagga caagccagaa gctgctggat cctgtctggc
721 accagcagac actgagcaac aagatcacac gtctccgaat gagaatgacc aggtcacacc
781 gcaacaccgg gaaccggccg gtcccaacac ccaaatcagg agtggctctg ctccaccagc
841 aactcctgtg atggtgcctg attccgccgt ggcgagtgac aacagtccag tgacccagcc
901 ggccggcgag tggtcagagg gcagccaggc tcacgtcact ccggtggccg ctgtccctgg
961 gcctgcagcg ctgcccttcc tctatgtccc tggatctccc actcagatga attcttacgg
1021 gcctgtggtg gcccttccca cagcgtcccg tagtaccctt gccatggaca ccacaggact
1081 tcctgcacct ggcatgctgc ccttttgcca tctctgggta ccggtgaccc tagtggctgc
1141 tggggctgca cagcctgctg cctccatggt catgttcccc catctcccag ctctgcacca
1201 ccattgcccc cacagccacc gcacgtcaca gtacatgcca gctagcgatg ggccccaggc
1261 gtacccagac tacgcagacc agagcacata gagggcagca tttgggcaga atatgtgctg
1321 gtcaataaat gtgtcagaaa atgagtaatt ttctgactgc acaaaaaaaa aaaaaaaa
//