LOCUS BC021700 1777 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens RYK receptor-like tyrosine kinase, mRNA (cDNA clone
IMAGE:4052080), partial cds.
ACCESSION BC021700
VERSION BC021700.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1777)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1777)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC021700.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1777
/db_xref="H-InvDB:HIT000090449"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4052080"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1777
/gene="RYK"
/gene_synonym="D3S3195"
/gene_synonym="RYK1"
/db_xref="GeneID:6259"
/db_xref="MIM:600524"
CDS <1..1189
/gene="RYK"
/gene_synonym="D3S3195"
/gene_synonym="RYK1"
/codon_start=2
/product="RYK protein"
/protein_id="AAH21700.2"
/db_xref="GeneID:6259"
/db_xref="MIM:600524"
/translation="DPVHAAPTTSTRVFYISVGVCCAVIFLVAIILAVLHLHSMKRIE
LDDSISASSSSQGLSQPSTQTTQYLRADTPNNATPITSSLGYPTLRIEKNDLRSVTLL
EAKGKVKDIAISRERITLKDVLQEGTFGRIFHGILIDEKDPNKEKQAFVKTVKDQASE
IQVTMMLTESCKLRGLHHRNLLPITHVCIEEGEKPMVILPYMNWGNLKLFLRQCKLVE
ANNPQAISQQDLVHMAIQIACGMSYLARREVIHKDLAARNCVIDDTLQVKITDNALSR
DLFPMDYHCLGDNENRPVRWMALESLVNNEFSSASDVWAFGVTLWELMTLGQTPYVDI
DPFEMAAYLKDGYRIAQPINCPDELFAVMACCWALDPEERPKFQQLVQCLTEFHAALG
AYV"
BASE COUNT 546 a 349 c 382 g 500 t
ORIGIN
1 tgatcctgta catgcagctc caaccacttc tacgcgtgtg ttttatatta gtgtaggggt
61 ttgttgtgca gtaatatttc tcgtagcaat aatattagct gttttgcacc ttcatagtat
121 gaaaaggatt gaactggatg acagcattag tgccagcagt agttcccaag ggctgtctca
181 gccatccacc cagacgactc agtatctgag agcagacacg cccaacaatg caactcctat
241 caccagctcc ttaggttatc ctaccttgcg gatagagaag aacgacttga gaagtgtcac
301 tcttttggag gccaaaggca aggtgaagga tatagcaata tccagagaga ggataactct
361 aaaagatgta ctccaagaag gtacttttgg gcgtattttc catgggattt taatagatga
421 aaaagatcca aataaagaaa aacaagcatt tgtcaaaaca gttaaagatc aagcttctga
481 aattcaggtg acaatgatgc tcactgaaag ttgtaagctg cgaggtcttc atcacagaaa
541 tcttcttcct attactcatg tgtgtataga agaaggagaa aagcccatgg tgatattgcc
601 ttacatgaat tgggggaatc ttaaattgtt tttacgacag tgcaagttag tagaggccaa
661 taatccacag gcaatttctc agcaagacct ggtacacatg gctattcaga ttgcctgtgg
721 aatgagctac ctggccagaa gggaagtcat ccacaaagac ctggctgcca ggaactgtgt
781 cattgatgac acacttcaag ttaagatcac agacaatgcc ctctccagag acttgttccc
841 catggactat cactgtctgg gggacaatga aaacaggcca gttcgttgga tggctcttga
901 aagtctggtt aataacgagt tctctagcgc tagtgatgtg tgggcctttg gagtgacgct
961 gtgggaactc atgactctgg gccagactcc ctacgtggac attgacccct tcgagatggc
1021 cgcatacctg aaagatggtt accgaatagc ccagccaatc aactgtcctg atgaattatt
1081 tgctgtgatg gcctgttgct gggccttaga tccagaggag aggcccaagt ttcagcagct
1141 ggtacagtgc ctaacagagt ttcatgcagc cctgggggcc tacgtctgac tcctctccaa
1201 tcccacacca tcaggaagaa ggtgcctgtc ggggctcact tgaagcctgt cagggatgct
1261 ttgtatctaa cacaacgcca acagaagcac atttgtcttc cagaacaccg tgccttagaa
1321 atgctttaga atctgaactt tttaagacag acttaataat gtggcatatt ttctagatat
1381 cacttttatt aggttgaact gaaagggttt ttgtaaattt tttggccaaa attttttaaa
1441 acatacttac tttggactag gggtacattc ttacaaaata aataaacagt ttttaaaatt
1501 gtttagacac agatatttgg aattagctat cttagtgcca actgcttttt atttttttac
1561 ttcatcaagg tgatgtaagt gactcacctt taaagttttt tttagtgtta ttttttatca
1621 ctactctggg aaatggtttg tcttcaagat gcaatacttt tcttagtaaa ggaaaaacag
1681 cataaaaaga tacctggtct gccttgtaca agaaaaggca atattagagg aagaaaattt
1741 aaagaaaagc aaaaaaaaaa aaaaaaaaaa aaaaaaa
//