LOCUS BC021675 2006 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetraspanin 2, mRNA (cDNA clone MGC:22863
IMAGE:4042036), complete cds.
ACCESSION BC021675
VERSION BC021675.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2006)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2006)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: k Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331193.
FEATURES Location/Qualifiers
source 1..2006
/db_xref="H-InvDB:HIT000039242"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22863 IMAGE:4042036"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2006
/gene="TSPAN2"
/gene_synonym="6330415F13Rik"
/gene_synonym="FLJ12082"
/gene_synonym="RP4-666F24.2"
/gene_synonym="TSN2"
/gene_synonym="TSPAN-2"
/db_xref="GeneID:10100"
/db_xref="HGNC:HGNC:20659"
CDS 34..699
/gene="TSPAN2"
/gene_synonym="6330415F13Rik"
/gene_synonym="FLJ12082"
/gene_synonym="RP4-666F24.2"
/gene_synonym="TSN2"
/gene_synonym="TSPAN-2"
/codon_start=1
/product="tetraspanin 2"
/protein_id="AAH21675.1"
/db_xref="GeneID:10100"
/db_xref="HGNC:HGNC:20659"
/translation="MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGAIKE
LSSEDKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAE
VTTGVFAFIGKGVAIRHVQTMYEEAYNDYLKDRGKGNGTLITFHSTFQCCGKESSEQV
QPTCPKELLGHKNCIDEIETIISVKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSR
DVI"
BASE COUNT 629 a 368 c 413 g 596 t
ORIGIN
1 gggggactgg ggatcccgcc gccgggccgc agcatggggc gcttccgcgg gggcctgcgg
61 tgcatcaagt acctgctgct tggcttcaac ctgctcttct ggctggctgg atcggccgtc
121 attgcttttg gactatggtt tcggttcgga ggtgccataa aggagttatc atcagaggac
181 aagtccccag agtatttcta tgtggggctg tatgttctgg ttggagccgg ggccctgatg
241 atggccgtgg ggttcttcgg atgctgcgga gccatgcggg agtcgcaatg tgtgcttgga
301 tcatttttta cctgcctcct ggtgatattt gctgctgaag taaccactgg agtatttgct
361 tttataggca agggggtagc tatccgacat gttcagacca tgtatgaaga ggcttacaat
421 gattacctta aagacagggg aaaaggcaat gggacactca tcaccttcca ctcaacattt
481 cagtgctgtg gaaaagaaag ctccgaacag gtccaaccta catgcccaaa ggagcttcta
541 ggacacaaga attgcatcga tgaaattgag accataatca gtgttaagct ccagctcatt
601 ggaattgtcg gtattggaat tgcaggtctg acgatctttg gcatgatatt cagcatggtc
661 ctctgctgtg cgatacgaaa ctcacgagat gtgatatgaa gctacttcta catgaaaatt
721 gcagtctaaa gctttcatac caaatgtcac aggagctgtc tcccagctca tttttaacac
781 tgaaatgaca ttaggatcta aaataatttg ctgtcaattg tacatttgca tgagtacgta
841 tgtttggctc attactggtt taccccttga gtgaatgcct gtttatgatg actgagagca
901 tattcatgtg tgatctgcgt gtttctggaa tatgctttat acgtaatgaa atctgtttgc
961 tgggaattcc tgattcttgt tatataagaa gaacaaccta tttcgctccc agaaaaaaaa
1021 agatcaaaga gctttcagaa actttgagaa cttggctatt tagaaaaagt gataatgggt
1081 cagtttctca gactgtagcc attgaaaatt agatgcagag aattcagaga tttcttctta
1141 atggaagtaa taagctgtaa gaattgagag atcacaatgg agtgttaaaa ctgactgtgt
1201 ctaagttggg tgtaagggtt tcctgggttt ttttatatac atgctctccc cagaatacag
1261 taaaccacag ttttagaact aaacacatct gtaaaactaa atatagcatg gaaaatccaa
1321 tttgaataag tcatgctttc ctagaattta aaaataaaaa agtcttcctc tggaaagaga
1381 agtcacacag acaatcatgt gccctataaa agtgagtgtt tataggacta aaaaactttt
1441 aacaactttt taaggaaata tttttgttct tatacaaaaa catgtaaata ttgctttatt
1501 actttcattt tctgaccctg ctgtaaacta ctgcaaccct cacatcctca aagggacttt
1561 tatgtcaaac tcttctgttt ctccaaatat aaggaaaaaa gactaaagca agagatctgg
1621 cagttgaaaa ttgtgggaaa gagaatttgt atgggcactg tatctatgaa atacctcata
1681 acttacgttt acatgttttc ctaacttttt gtatttttct tgtatagcca cctagagaat
1741 tcttcataga ttaagaacta cagttttcac cacttaacat aagtaaaaca aagtccttca
1801 taatttaacc attagcatct ttggccaaac caaaataaag aaaagcatct tctcctagtt
1861 gtgtgtgggc aacagaaaca agttaaggaa acaaaaatac ttatatatac acagaacaaa
1921 aataatgttc tttttatgca aatcccctgt gaaaataaaa ttttcaatgt tttagaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaa
//