LOCUS BC021580 1693 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens nuclear apoptosis inducing factor 1, mRNA (cDNA clone
MGC:32044 IMAGE:4810929), complete cds.
ACCESSION BC021580
VERSION BC021580.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1693)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1693)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: h Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37537557.
FEATURES Location/Qualifiers
source 1..1693
/db_xref="H-InvDB:HIT000039227"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32044 IMAGE:4810929"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1693
/gene="NAIF1"
/gene_synonym="bA379C10.2"
/gene_synonym="DKFZp762G199"
/gene_synonym="RP11-379C10.2"
/db_xref="GeneID:203245"
/db_xref="HGNC:HGNC:25446"
/db_xref="MIM:610673"
CDS 66..584
/gene="NAIF1"
/gene_synonym="bA379C10.2"
/gene_synonym="DKFZp762G199"
/gene_synonym="RP11-379C10.2"
/codon_start=1
/product="NAIF1 protein"
/protein_id="AAH21580.1"
/db_xref="GeneID:203245"
/db_xref="HGNC:HGNC:25446"
/db_xref="MIM:610673"
/translation="MAVPAKKRKMNFSEREVEIIVEELELKKHLLVNHFNAGVPLAAK
SAAWHGILRRVNAVATCRRELPEVKKKWSDLKTEVRRKVAQVRAAVEGGEAPGPTEED
GAGGPGTGGGSGGGGPAVAPVLLTPMQQRICNLLGEATIISLPSTTEIHPVALGPSAT
AAAATVTLTQSE"
BASE COUNT 387 a 438 c 531 g 337 t
ORIGIN
1 gagaagggga attggggcgc ttgaggggat tataatttct ttaaaaagag gggaggggag
61 aggccatggc cgtcccagcc aagaaaagga agatgaactt ctcagagcgg gaggtggaga
121 tcatcgtgga ggagctggag ctgaagaagc acctgctggt gaaccacttc aacgccgggg
181 tacccctggc cgccaagagt gcggcctggc acggcatcct gagaagggtc aacgccgtgg
241 ccacctgccg cagagagctg cctgaggtca agaagaagtg gtctgacctc aagaccgagg
301 tccgtcgcaa ggttgcccag gtccgggccg ccgtggaggg tggtgaggcg ccggggccca
361 ctgaggagga cggagctggg gggcctggga caggcggtgg cagtggcggc ggtggcccag
421 ctgtagcccc agtgctgctg acccccatgc aacaacgtat ctgcaacctg ctgggcgagg
481 ccaccatcat cagcctgccc agcaccacag agatccaccc tgtggccctc ggaccctcgg
541 ccaccgcagc cgcagccacg gtcaccctga cacagagtga gtgacctctc ctgcccaggc
601 ggcgtgcata agtgggaagg gccagcaagc tctggggtgg cctggggaag gttggctgcc
661 aagggtcaga ggtcagatgg gggtcttgga agaccatgag gccttccaag agcagcaccc
721 agacagaagt gatcttgctc tctttgggac ttcctcagca cgtgggctgg acttctgacg
781 tgctggatag ctcgccactg agcattgcca ccatgtttgt ccatgactta cctccacttg
841 ccgaactggg tggtccttga aaacaagaga ccgtgtctgt atccccacag gacttttcac
901 agggcccggc ttgtagtaga cagccaggcc atatttgttg aaaaaattga tgggaataat
961 actgcccaag tgagacaacg attctggatt ctgttttcag tgtgggggat ctttcccaag
1021 gtgctgggat tgcaggcgtg agccaccgtg cccggccggg ggtgcctttc ttagctagga
1081 gcagcccagc gtggaggtca ggagcacatc gggctctgct gttggggaga cctgggtttg
1141 cctcttggct ctgctgaatg agctctgtga ccttagcaag tcattctaca tttctcagtc
1201 tgtttcctca tctctgaaaa atgaagatga cagcaccaac ctcttggtgt cattttgagg
1261 atttgttgag ctaatgagta caaagtgcct gacatgtagt agttgctcta aaagttttgc
1321 tagtattatg atcaacatct ttgcttttgc cagatccagg gctggccctt tgattaccaa
1381 gtagattaag attctgaacc ccggccgggc gcggtggctc acgcctgtaa tcccagcact
1441 ttgggaggcc gaggcgggcg gatcacgagg tcaggagatc gagaccacgg tgaaaccccg
1501 tctctactaa aaatacaaaa aattagccgg gcgcagtggc gggcgcctgt agtcccagct
1561 actcgggagg ctgaggcagg agaatggcgt gaacccggaa ggcggagctt gcagtgagcg
1621 gagatcgcgc cacagcactc ccgcctgggc gacagaacga gactccgtct caaaaaaaaa
1681 aaaaaaaaaa aaa
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