LOCUS BC021575 721 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens mitochondrial ribosomal protein L47, mRNA (cDNA clone
MGC:31986 IMAGE:3161966), complete cds.
ACCESSION BC021575
VERSION BC021575.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 721)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 721)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29826286.
FEATURES Location/Qualifiers
source 1..721
/db_xref="H-InvDB:HIT000090425"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31986 IMAGE:3161966"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..721
/gene="MRPL47"
/gene_synonym="CGI-204"
/gene_synonym="MGC45403"
/gene_synonym="NCM1"
/db_xref="GeneID:57129"
/db_xref="HGNC:HGNC:16652"
CDS 207..629
/gene="MRPL47"
/gene_synonym="CGI-204"
/gene_synonym="MGC45403"
/gene_synonym="NCM1"
/codon_start=1
/product="mitochondrial ribosomal protein L47"
/protein_id="AAH21575.1"
/db_xref="GeneID:57129"
/db_xref="HGNC:HGNC:16652"
/translation="MLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALR
LLQTGQERARPGAWRRDIFGRIIWHKFKQWVIPWHLNKRYNRKRFFALPYVDHFLRLE
REKRARIKARKENLERKKAKILLKKFPHLAEAQKSSLV"
BASE COUNT 264 a 134 c 153 g 170 t
ORIGIN
1 gttttgccag ttatgcgaaa acatggctgc ggccggtttg gcccttcttt gtaggagagt
61 ttcatccgcc ctgaaatctt cccgatcgtt aataactcct caggtccctg cctgcacagg
121 gagcagcatg gacctgtcag caactaagga acaaaagtaa tgaagattta cacaaacttt
181 ggtatgtctt actgaaagaa agaaacatgc ttctaaccct agagcaggag gccaagcggc
241 agagattgcc aatgccaagt ccagagcggt tagataaggt agtagattcc atggatgcat
301 tagataaagt tgtccaggaa agagaagatg ccctaaggct tcttcagact ggtcaagaaa
361 gagctagacc tggtgcttgg agaagagaca tctttggaag aatcatctgg cacaagttca
421 agcagtgggt tataccttgg cacctaaata aaagatacaa taggaaacga ttctttgcct
481 tgccttatgt ggaccatttt ctcagactgg aacgtgagaa acgagcccgc atcaaagcac
541 ggaaggaaaa tttagagaga aagaaagcaa aaattctttt aaaaaagttt ccacatcttg
601 ctgaagccca aaagtcaagt cttgtctaag atgtctgaac tattaaattt accattttgt
661 ttttcttgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
721 a
//