LOCUS BC021564 1292 bp mRNA linear HUM 22-FEB-2007 DEFINITION Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:31891 IMAGE:4579604), complete cds. ACCESSION BC021564 VERSION BC021564.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1292) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1292) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: e Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 17986282. FEATURES Location/Qualifiers source 1..1292 /db_xref="H-InvDB:HIT000039219" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:31891 IMAGE:4579604" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1292 /gene="TUBA1B" /gene_synonym="K-ALPHA-1" /db_xref="GeneID:10376" /db_xref="HGNC:HGNC:18809" /db_xref="MIM:602530" CDS 82..1089 /gene="TUBA1B" /gene_synonym="K-ALPHA-1" /codon_start=1 /product="TUBA1B protein" /protein_id="AAH21564.1" /db_xref="GeneID:10376" /db_xref="HGNC:HGNC:18809" /db_xref="MIM:602530" /translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN YARGHYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI SAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT IKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEE Y" BASE COUNT 314 a 341 c 322 g 315 t ORIGIN 1 ctcgactctt agcttgtcgg ggacggtaac cgggacccgg tgtctgctcc tgtcgccttc 61 gcctcctaat ccctagccac tatgcgtgag tgcatctcca tccacgttgg ccaggctggt 121 gtccagattg gcaatgcctg ctgggagctc tactgcctgg aacacggcat ccagcccgat 181 ggccagatgc caagtgacaa gaccattggg ggaggagatg actccttcaa caccttcttc 241 agtgagacgg gcgctggcaa gcacgtgccc cgggctgtgt ttgtagactt ggaacccaca 301 gtcattgatg aagttcgcac tggcacctac cgccagctct tccaccctga gcagctcatc 361 acaggcaagg aagatgctgc caataactat gcccgagggc actacactaa ccttaaccgc 421 cttattagcc agattgtgtc ctccatcact gcttccctga gatttgatgg agccctgaat 481 gttgacctga cagaattcca gaccaacctg gtgccctacc cccgcatcca cttccctctg 541 gccacatatg cccctgtcat ctctgctgag aaagcctacc atgaacagct ttctgtagca 601 gagatcacca atgcttgctt tgagccagcc aaccagatgg tgaaatgtga ccctcgccat 661 ggtaaataca tggcttgctg cctgttgtac cgtggtgacg tggttcccaa agatgtcaat 721 gctgccattg ccaccatcaa aaccaagcgc agcatccagt ttgtggattg gtgccccact 781 ggcttcaagg ttggcatcaa ctaccagcct cccactgtgg tgcctggtgg agacctggcc 841 aaggtacaga gagctgtgtg catgctgagc aacaccacag ccattgctga ggcctgggct 901 cgcctggacc acaagtttga cctgatgtat gccaagcgtg cctttgttca ctggtacgtg 961 ggtgagggga tggaggaagg cgagttttca gaggcccgtg aagatatggc tgcccttgag 1021 aaggattatg aggaggttgg tgtggattct gttgaaggag agggtgagga agaaggagag 1081 gaatactaat tatccattcc ttttggccct gcagcatgtc atgctcccag aatttcagct 1141 tcagcttaac tgacagacgt taaagctttc tggttagatt gttttcactt ggtgatcatg 1201 tcttttccat gtgtacctgt aatatttttc catcatatct caaagtaaag tcattaacat 1261 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //