LOCUS BC021550 1989 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens pyridoxal (pyridoxine, vitamin B6) kinase, mRNA (cDNA
clone MGC:31754 IMAGE:4905448), complete cds.
ACCESSION BC021550
VERSION BC021550.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1989)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1989)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249705.
FEATURES Location/Qualifiers
source 1..1989
/db_xref="H-InvDB:HIT000039207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31754 IMAGE:4905448"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1989
/gene="PDXK"
/gene_synonym="PKH"
/gene_synonym="PNK"
/gene_synonym="PRED79"
/db_xref="GeneID:8566"
/db_xref="HGNC:HGNC:8819"
/db_xref="MIM:179020"
CDS 259..747
/gene="PDXK"
/gene_synonym="PKH"
/gene_synonym="PNK"
/gene_synonym="PRED79"
/codon_start=1
/product="pyridoxal (pyridoxine, vitamin B6) kinase"
/protein_id="AAH21550.1"
/db_xref="GeneID:8566"
/db_xref="HGNC:HGNC:8819"
/db_xref="MIM:179020"
/translation="MGHKARLPAGTRVFHTSCVVGSLTPFRLGGGKADPPSACRAHLA
QASPPRGCCSHFCPFPRPGPRSLRPYHKVRSFFHTVSWAWQSLHLVASIPSGPFERIS
WSSLSELPGLRALGRSLRSWRSAGGRVALSWLSECRARGDGTGALLLGLVVPAAGKGQ
LV"
BASE COUNT 417 a 564 c 602 g 406 t
ORIGIN
1 cgcctgcagg ttttgggatt tgagattgac gcggtgaact ctgtccagtt ttcaaaccac
61 acagagacaa ggtcggtctc tgtcgcccag gctggcgtga agtggcgcaa ccagctcact
121 gcagccttga cctcctgggc tgaagcaatc tttctgcctc cacctcccga gtggctggga
181 ctatagttgt gcaccagcac gcccacctcc tgcccagggt tgttactggg gtggtcacgt
241 gggcagcttc tgcctgggat gggccacaaa gccagactcc cggcagggac acgggtgttc
301 cacacaagct gcgttgttgg ttccctgacg cccttcaggc tggggggtgg gaaagccgat
361 cccccaagtg cctgcagagc ccacctggcg caggcctcgc cgcctcgagg ctgctgctcg
421 cacttctgcc ccttcccccg gccaggcccc cgttccttga ggccgtacca caaggtgcgt
481 tcatttttcc acaccgtgag ctgggcttgg cagagcctcc accttgtggc cagtattccc
541 agtggcccct ttgagaggat ttcctggagc tccctgtctg agcttcccgg actgagggca
601 ctgggaagga gcctgcggag ctggaggtca gcgggtggac gggttgcgct gtcctggctt
661 tcggagtgta gagccagagg ggatgggaca ggtgccctgc tgctgggctt ggtggtccct
721 gctgcaggga aggggcagct ggtgtgaaca caaggagctg cggggctgga gaaggccagg
781 gccaggagcc tgccgacgga caccagcgag gggccaggcc gggccaggag cctgccgacg
841 gacaccagcg aggggccagg ccgggccaga ctccctggcc ggctgggatc tgacaggagc
901 gccaggctcc ttgggccgcc cgaggaaccg cttgtttgcc tgtgcttttt catctgtaaa
961 tggaatgagt tggacacaag atccaagcgc cctcccctgt tggagaaggt tcttgtgggc
1021 tctgggccca tcccacatcc cacagtgggc aggaggccac caagaggtgc aagaccatgc
1081 cctctgtttc gataggaagc tgggcctcag aggggcctgg ggcctgtgtc tgagacccgg
1141 ccaagtgctg gacgtctccc cttcctcatg gctgttatgg ctgaattacg tccccccaaa
1201 ttctcatgtt gcagccttaa ccccagcacc tcagtgtggg actgggtttg gagatggagc
1261 ccctacagag gtcagcaggt taaaagaggc catcagggct ctgggtgggc cctgatccaa
1321 gctgcttggt gtccttgtaa gaagaagaga tgaggacaca gacacacaca gagggacagc
1381 cccatgagga aacagggagg caatgccgtc tgcaagccca gggcagaggc ctcaggaacc
1441 agccctggtg acacctggac cttggacccc cgtgcccagg acagtaggag aattggagcc
1501 gcctggctgc agtccttccc gatggcaccc tgtattagtc cgttctcaca ctgctaattg
1561 ttgggaaaag ggcttgtgga atgcctgtat aaactggcca tgaaaatatg ggacaataag
1621 ttgtggaaag ccacaagagg cctctgagga ggaaagcctc ctaattgcca tcatgttcgc
1681 atgctcaggg cgagacctgc tgtcttatct gtaaacactg tgttcaagga gaaagacatt
1741 ccttcgaagc actggactgt ggacagacac acgagctcct ggttaagccc gctcccacca
1801 gctcctgtcc gataagttaa agatacgctg tttgagcaca aaggagattc attgaaaccg
1861 ctattgctgt agattacgcc tgtgacgcac tgcctccctt tcactgtttc gccctgaata
1921 tctgcttctc agatctaagt gactgtactc aataaatagc gtggagacca gaaaaaaaaa
1981 aaaaaaaaa
//