LOCUS BC021303 2443 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens calpain 2, (m/II) large subunit, mRNA (cDNA clone MGC:29448 IMAGE:5090865), complete cds. ACCESSION BC021303 VERSION BC021303.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2443) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2443) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC021303.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: p Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12408645. FEATURES Location/Qualifiers source 1..2443 /db_xref="H-InvDB:HIT000039201" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29448 IMAGE:5090865" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_42" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2443 /gene="CAPN2" /gene_synonym="CANPL2" /gene_synonym="CANPml" /gene_synonym="mCANP" /db_xref="GeneID:824" /db_xref="HGNC:HGNC:1479" /db_xref="MIM:114230" CDS 119..2221 /gene="CAPN2" /gene_synonym="CANPL2" /gene_synonym="CANPml" /gene_synonym="mCANP" /codon_start=1 /product="calpain 2, (m/II) large subunit" /protein_id="AAH21303.1" /db_xref="GeneID:824" /db_xref="HGNC:HGNC:1479" /db_xref="MIM:114230" /translation="MAGIAAKLAKDREAAEGLGSHERAIKYLNQDYEALRNECLEAGT LFQDPSFPAIPSALGFKELGPYSSKTRGIEWKRPTEICADPQFIIGGATRTDICQGAL GDCWLLAAIASLTLNEEILARVVPLNQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPT KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELK KPPPNLFKIIQKALQKGSLLGCSIDITSAADSEAITFQKLVKGHAYSVTGAEEVESNG SLQKLIRIRNPWGEVEWTGRWNDNCPSWNTIDPEERERLTRRHEDGEFWMSFSDFLRH YSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLE EEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELSGQTNIHLSK NFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVFSEKKAD YQAVDDEIEANLEEFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQD IKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNS YEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQLDPE NTGTIELDLISWLCFSVL" BASE COUNT 640 a 627 c 689 g 487 t ORIGIN 1 cagcggcggc gcccgcagtg gccgcagcag cgcgccgggc cctggccgcg ccccagccga 61 gcgcagcgcg gagtcgcccc gacctttctc tgcgcagtac ggccgccggg accgcagcat 121 ggcgggcatc gcggccaagc tggcgaagga ccgggaggcg gccgaggggc tgggctccca 181 cgagagggcc atcaagtacc tcaaccagga ctacgaggcg ctgcggaacg agtgcctgga 241 ggccgggacg ctcttccagg acccgtcctt cccggccatc ccctcggccc tgggcttcaa 301 ggagttgggg ccctactcca gcaaaacccg gggcatcgag tggaagcgcc ccacggagat 361 ctgcgctgac ccccagttta tcattggagg agccacccgc acagacatct gccaaggagc 421 cctaggtgac tgctggctgc tggcagccat tgcctccctc accttgaatg aagaaatcct 481 ggctcgagtc gtccccctaa accagagctt ccaggaaaac tatgcaggga tctttcactt 541 ccagttctgg caatacggcg agtgggtgga ggtggtggtg gatgacaggc tgcccaccaa 601 ggacggggag ctgctctttg tgcattcagc cgaagggagc gagttctgga gcgccctgct 661 ggagaaggca tacgccaaga tcaacggatg ctatgaagca ctatcagggg gtgccaccac 721 tgagggcttc gaagacttca ccggaggcat tgctgagtgg tatgagttga agaagccccc 781 tcccaacctg ttcaagatca tccagaaagc tctgcaaaaa ggctctctcc ttggctgctc 841 catcgacatc accagcgccg cggactcgga ggccatcacg tttcagaagc tggtgaaggg 901 gcacgcgtac tcggtcaccg gagccgagga ggttgaaagt aacggaagcc tacagaaact 961 gatccgcatc cgaaatccct ggggagaagt ggagtggaca gggcggtgga atgacaactg 1021 cccaagctgg aacactatag acccagagga gagggaaagg ctgaccagac ggcatgaaga 1081 tggagaattc tggatgtctt tcagtgactt cctgaggcac tattcccgcc tggagatctg 1141 taacctgacc ccagacactc tcaccagcga tacctacaag aagtggaaac tcaccaaaat 1201 ggatgggaac tggaggcggg gctccaccgc gggaggttgc aggaactacc cgaacacatt 1261 ctggatgaac cctcagtacc tgatcaagct ggaggaggag gatgaggacg aggaggatgg 1321 ggagagcggc tgcaccttcc tggtggggct cattcagaag caccgacggc ggcagaggaa 1381 gatgggcgag gacatgcaca ccatcggctt tggcatctat gaggttccag aggagttaag 1441 tgggcagacc aacatccacc tcagcaaaaa cttcttcctg acgaatcgcg ccagggagcg 1501 ctcagacacc ttcatcaacc tccgggaggt gctcaaccgc ttcaagctgc cgccaggaga 1561 gtacattctc gtgccttcca ccttcgaacc caacaaggat ggggatttct gcatccgggt 1621 cttttctgaa aagaaagctg actaccaagc tgtcgatgat gaaatcgagg ccaatcttga 1681 agagttcgac atcagcgagg atgacattga tgatggattc aggagactgt ttgcccagtt 1741 ggcaggagag gatgcggaga tctctgcctt tgagctgcag accatcctga gaagggttct 1801 agcaaagcgc caagatatca agtcagatgg cttcagcatc gagacatgca aaattatggt 1861 tgacatgcta gattcggacg ggagtggcaa gctggggctg aaggagttct acattctctg 1921 gacgaagatt caaaaatacc aaaaaattta ccgagaaatc gacgttgaca ggtctggtac 1981 catgaattcc tatgaaatgc ggaaggcatt agaagaagca ggtttcaaga tgccctgtca 2041 actccaccaa gtcatcgttg ctcggtttgc agatgaccag ctcatcatcg attttgataa 2101 ttttgttcgg tgtttggttc ggctggaaac gctattcaag atatttaagc agctggatcc 2161 cgagaatact ggaacaatag agctcgacct tatctcttgg ctctgtttct cagtactttg 2221 aagttataac taatctgcct gaagacttct catgatggaa aatcagccaa ggactaagct 2281 tccatagaaa tacactttgt atctggacct caaaattatg ggaacattta cttaaacgga 2341 tgatcatagc tgaaaataat gatactgtca atttgagata gcagaagttt cacacatcaa 2401 agtaaaagat ttgcatatca ttatactaaa aaaaaaaaaa aaa //