LOCUS BC021278 2405 bp mRNA linear HUM 09-MAY-2005
DEFINITION Homo sapiens hexokinase domain containing 1, mRNA (cDNA clone
IMAGE:4873280), complete cds.
ACCESSION BC021278
VERSION BC021278.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2405)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2405)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC021278.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33342275
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2405
/db_xref="H-InvDB:HIT000039185"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4873280"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2405
/gene="HKDC1"
/gene_synonym="FLJ22761"
/gene_synonym="FLJ37767"
/db_xref="GeneID:80201"
CDS 310..1593
/gene="HKDC1"
/gene_synonym="FLJ22761"
/gene_synonym="FLJ37767"
/codon_start=1
/product="HKDC1 protein"
/protein_id="AAH21278.1"
/db_xref="GeneID:80201"
/translation="MRAELEYGLKKKSHGLATVRMLPTYVCGLPDGTEKGKFLALDLG
GTNFRVLLVKIRSGRRSVRMYNKIFAIPLEIMQGTGEELFDHIVQCIADFLDYMGLKG
ASLPLGFTFSFPCRQMSIDKGTLIGWTKGFKATDCEGEDVVDMLREAIKRRNEFDLDI
VAVVNDTVGTMMTCGYEDPNCEIGLIAGTGSNMCYMEDMRNIEMVEGGEGKMCINTEW
GGFGDNGCIDDIRTRYDTEVDEGSLNPGKQRYEKMTSGMYLGEIVRQILIDLTKQGLL
FRGQISERLRTRGIFETKFLSQIESDRLALLQVRRILQQLGLDSTCEDSIVVKEVCGA
VSRRAAQLCGAGLAAIVEKRREDQGLEHLRITVGVDGTLYKLHPHFSRILQETVKELA
PRCDVTFMLSEDGSGKGAALITAVAKRLQQAQKEN"
BASE COUNT 597 a 541 c 723 g 544 t
ORIGIN
1 agcagctctg gcggccatcc tgacacgcct ccgggagaac aagaaggtgg aacggctccg
61 gaccacagtg ggcatggacg gcaccctcta caagatacac cctcagtacc caaaacgcct
121 gcacaaggtg gtgaggaaac tggtcccaag ctgtgatgtc cgcttcctcc tgtcagagag
181 tggcagcacc aagggggccg ccatggtacc gcggtggcct cccgcgtgca ggcccagcgg
241 aagcagatcg acagggtgct ggctttgttc cagctgaccc gagagcagct cgtggacgtg
301 caggccaaga tgcgggctga gctggagtat gggctgaaga agaagagcca cgggctggcc
361 acggtcagga tgctgcccac ctacgtctgc gggctgccgg acggcacaga gaaaggaaag
421 tttctcgccc tggatcttgg gggaaccaac ttccgggtcc tcctggtgaa gatcagaagt
481 ggacggaggt cagtgcgaat gtacaacaag atcttcgcca tccccctgga gatcatgcag
541 ggcactggtg aggagctctt tgatcacatt gtgcagtgca tcgccgactt cctggactac
601 atgggcctca agggagcctc cctacctttg ggcttcacat tttcatttcc ctgcaggcag
661 atgagcattg acaagggaac actcataggg tggaccaaag gtttcaaggc cactgactgt
721 gaaggggagg acgtggtgga catgctcagg gaagccatca agaggagaaa cgagtttgac
781 ctggacattg ttgcagtcgt gaatgataca gtggggacca tgatgacctg tggctatgaa
841 gatcctaatt gtgagattgg cctgattgca ggaacaggca gcaacatgtg ctacatggag
901 gacatgagga acatcgagat ggtggagggg ggtgaaggga agatgtgcat caatacagag
961 tggggaggat ttggagacaa tggctgcata gatgacatcc ggacccgata cgacacggag
1021 gtggatgagg ggtccttgaa tcctggcaag cagagatacg agaaaatgac cagtgggatg
1081 tacttggggg agattgtgcg gcagatcctg atcgacctga ccaagcaggg tctcctcttc
1141 cgagggcaga tttcagagcg tctccggacc aggggcatct tcgaaaccaa gttcctgtcc
1201 cagatcgaaa gcgatcggct ggcccttctc caggtcagga ggattctgca gcagctgggc
1261 ctggacagca cgtgtgagga cagcatcgtg gtgaaggagg tgtgcggagc cgtgtcccgg
1321 cgggcggccc agctctgcgg tgctggcctg gccgctatag tggaaaaaag gagagaagac
1381 caggggctag agcacctgag gatcactgtg ggtgtggacg gcaccctgta caagctgcac
1441 cctcactttt ctagaatatt gcaggaaact gtgaaggaac tagcccctcg atgtgatgtg
1501 acattcatgc tgtcagaaga tggcagtgga aaaggggcag cactgatcac tgctgtggcc
1561 aagaggttac agcaggcaca gaaggagaac taggaacccc tgggattgga cctgatgcat
1621 cttggatact gaacagcttt tcctctggca gatcagttgg tcagagacca atgggcaccc
1681 tcctggctga cctcaccttc tggatggccg aaagagaacc ccaggttctc gggtactctt
1741 agtatcttgt actggatttg cagtgacatt acatgacatc tctatttggt atatttgggc
1801 caaaatgggc caacttatga aatcaaagtg tctgtcctga gagatcccct ttcaacacat
1861 tgttcaggtg aggcttgagc tgtcaattct ctatggcttt cagtcttgtg gctgcgggac
1921 ttggaaatat atagaatctg cccatgtggc tggcaggctg tttccccatt gggatgctta
1981 agccatctct tataggggat tggaccctgt acttgtggat gaacattgga gagcaagagg
2041 aactcacgtt atgaactagg gggatctcat ctaacttgtc cttaacttgc catgttgact
2101 tcaaacctgt taagagaaca aagactttga agtatccagc cccagggtgc agagaggttg
2161 attgccaggg agcactgcag gaatcattgc atgcttaaag cgagttatgt cagcaccctg
2221 taggattttg ttccttatta agtgtgtgcc atgtggtggg gtgctgtctg gggcatctgt
2281 ttttcatttt gcctgtggtt tgtgttgcag gtgttgatag ttgttttaag gattgttagg
2341 tataggaaat ccagtaaatt aataaaaaaa ttttgatttt ccaataaaaa aaaaaaaaaa
2401 aaaaa
//