LOCUS BC021247 4045 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens phosphatase and actin regulator 4, mRNA (cDNA clone
MGC:20618 IMAGE:4577873), complete cds.
ACCESSION BC021247
VERSION BC021247.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4045)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4045)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021247.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: j Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254956.
FEATURES Location/Qualifiers
source 1..4045
/db_xref="H-InvDB:HIT000039168"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20618 IMAGE:4577873"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4045
/gene="PHACTR4"
/gene_synonym="RP11-442N24__A.1"
/db_xref="GeneID:65979"
/db_xref="HGNC:HGNC:25793"
/db_xref="MIM:608726"
CDS 215..2353
/gene="PHACTR4"
/gene_synonym="RP11-442N24__A.1"
/codon_start=1
/product="PHACTR4 protein"
/protein_id="AAH21247.3"
/db_xref="GeneID:65979"
/db_xref="HGNC:HGNC:25793"
/db_xref="MIM:608726"
/translation="MGQADVSRPVNPDAVEEADQPTTEPGMVLDSVEAGDTTPPTKRK
SKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQGG
EDPGKPSDAMLKNGHTTPIGNARSSSPVQVEEEPVRLASLRKAIPEEDLKKRLGSTGS
QPNSEAESVPENVPKPPLLPPKRPLSSSHEASEGQAKDATSSGGTARFIISTSITTAP
AATTAATSLAKTVNLSVTPSPAPRTLPAAPASTNTTATPSLTHMVPAKQPPIPPPKPA
HRNSNPVIAELSQAINSGTLLSKPSPPLPPKRGIPSTSVPTLESAAAITTKTPSDERE
KSTCSMGSELLPMISPRSPSPPLPTHIPPEPPRTPPFPAKTFQVVPEIEFPPSLDLHQ
EIPQQEDQKKEVPKRILDQNFGEPHIPSRLPPLPLHIRIQQALTSPLPMTPILEGSHR
AHSLLFENSDSFSEDSSTLGRTRSLPITIEMLKVPDDEEEEEQTCPSTFSEEMTPTSV
IPKLPQCLREEEEKESDSDSEGPIQYRDEEDEDESYQSALANKVKRKDTLAMKLNHRP
SEPELNLNSWPCKSKEEWNEIRHQIGNTLIRRLSQRPTPEELEQRNILQPKNEADRQA
EKREIKRRLTRKLSQRPTVAELLARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADK
AAIRKELNEFKSSEMEVHEESKHFTRYHRP"
BASE COUNT 1172 a 999 c 864 g 1010 t
ORIGIN
1 gtgtgaagac agttttgtaa gaactgcaag tgctcaggct gtatgggaaa cagaaacttc
61 agcagatgaa ctgaccttat gccatttcct gatgtttggc agtgacactg aaagaggacc
121 gcatgtcccc tctttatgtg gatttatctt ttatgaaaag tttgcttttg tccgggacag
181 tttgttgtcg tgagatacat cagacaatat aatcatggga caagctgatg tctccagacc
241 ggtaaatcca gatgcagttg aggaagcaga ccagcccact acagagccag gcatggtcct
301 ggacagtgtg gaagcaggag acacaacacc tcctaccaaa aggaagagca agttctcagg
361 ctttggcaag atcttcaagc cctggaaatg gaggaaaaaa aaaagtagtg ataaatttaa
421 agagacttca gaagttttag aacggaaaat atctatgcga aagccaagag aagagctggt
481 taaaagaggg gttctgttgg aagaccctga gcaaggtggt gaggatccag gaaagccaag
541 cgatgccatg ttaaagaatg gccataccac ccccataggg aatgccagat catctagtcc
601 agtccaagta gaggaagagc cagtaagatt agcaagtctt aggaaagcta ttccagaaga
661 ggacctaaag aaacgactag gctcaactgg aagccagcct aattctgaag cagagtctgt
721 tcctgagaat gtacccaaac cacctttact tcctcccaaa agacccttgt cctcttctca
781 tgaagcaagt gaagggcaag caaaggatgc cacttcctct ggcggcacgg caaggttcat
841 catctccacc tccatcacca cagcacccgc tgccaccact gctgccacaa gccttgcaaa
901 gactgttaat ctctctgtca ccccttcccc agcacccagg actctgcctg ctgctcctgc
961 cagcactaac actactgcta ccccaagcct cactcatatg gtccctgcca agcagccccc
1021 tatccctccc cctaaaccag ctcacagaaa tagcaaccct gtcattgctg aactgtccca
1081 agcaataaac agtggtacat tgttatcaaa accgtcccca cccttaccac ctaagagagg
1141 cattccatca acctcagtac ccaccttgga gtctgctgct gccatcacca caaaaacacc
1201 aagtgatgaa agagagaaga gcacgtgttc tatgggctcg gaactactac caatgatctc
1261 acctcgctct ccgtcccccc cactgcctac tcatatacct ccagagcctc cacgcacccc
1321 tccattccct gctaagactt ttcaagttgt gccagaaatt gagtttccac catccttaga
1381 tctacaccag gagattcccc agcaggaaga tcagaaaaag gaagtcccca agaggatact
1441 ggaccagaac tttggggagc cccatatacc ctctaggctg cctccactcc cactgcatat
1501 tcgaatccag caggccctca ccagcccact tcccatgact cctattctgg agggttctca
1561 cagagctcat tcgttgcttt ttgaaaacag tgacagcttt tctgaggaca gcagtacgct
1621 gggtcggacc aggtctcttc ccatcactat tgaaatgcta aaagttccag acgatgaaga
1681 agaagaggag caaacctgtc catccacatt cagtgaagaa atgacaccta cctcagtcat
1741 tcctaaatta ccacagtgtc tacgggagga agaagagaag gagagcgact ctgattcaga
1801 aggtcccatt cagtaccgag atgaagaaga tgaagatgaa agctatcaga gtgctctcgc
1861 caacaaagtg aagaggaaag acacactggc aatgaagttg aaccacagac ccagtgaacc
1921 agagttgaac ctgaattctt ggccttgtaa aagcaaggag gagtggaatg aaatacggca
1981 ccagattgga aacacactga tccggcgact gagtcaaaga ccaacaccag aagaactaga
2041 acaacgcaat atattgcaac ctaaaaatga agctgatcgt caggcagaaa aacgagaaat
2101 taaacgtcgg ctcactagaa agctcagtca aaggccaact gtcgctgaac tccttgccag
2161 gaagattctg aggtttaatg aatatgtaga ggtaacagat gctcaagatt atgaccggcg
2221 agccgacaaa ccttggacca aactgacccc tgctgacaag gctgccataa gaaaagaatt
2281 aaatgaattt aaaagctccg agatggaggt tcatgaagag agcaaacatt ttacacgcta
2341 ccatcgtcca tgatgccaaa ggttgagaga ggaatcaaca tggctgcttt gctgcttcct
2401 tctccaaagt gacatatgga gggaacttta gcacttccca gcacagccag aattgcatcc
2461 tctgggatct tctgaggtgg acagcacttt gaatgtagca tttcactgga acagagtctt
2521 atgtgctgca ccgggggcaa aacaacactt tgtcagtgct tttgaacctt tcaatattgt
2581 agcatgcttg aggagttttt cccttactgg ccaccaaagt tctgaaccac ttgcaggttc
2641 caggttttac tggctgcacc acaccccttc ccctagatga ctgcctgtgc agagacacag
2701 tttgcaccat tagccttacc tgccctgccc tgattgtgag acccaaatgt gtaggctcta
2761 aattccagcc atcaaatcca attcctggtg gggaaaacct tctggagacc cccaaccttc
2821 tgataaaaga gtctctacct ccagggaaag ccttcttacc acactggcat atcagatgaa
2881 agcattgcac tgtacctctc gtaacacagc aatacagtcc tcttgaggca ctcaagcctg
2941 agaggaagct caggatctga catgttcttc cttttcctca caagtcatca tgatttttta
3001 ttttaaaata atctggaagt aatgggaact tagtttttcc tgaactccaa ccagaatcca
3061 aattggttag atgaggccag gcgcggtggc tcacgcctgt aatcccaaag tggtgggatt
3121 acaggcatga gccaccgtgc gagccttcct tgaagttttt tgtttggttt tgatttgttt
3181 tgttttgttt tgttttgttt tgtttttgga gatagggtct cgctctgtta cccatgctgg
3241 agtgcagtgg cacaatcttg gctcagagca acctctgcct cccaggctca agcaatcctc
3301 ccacttcagt ctaagtagct gggactacag gcacgtgcca ccaggcccag ctaatttttg
3361 tgttttgtta gagatgaggt tttgccatgt tgcccaggct cgtcttgaac accggggctc
3421 aaggaatctg cccatcttcg cctcccaaag ttctgagata gcaggtgtga gtcatcatgc
3481 ccagcctcct tgaagtttac taacaattgg gataactgag ggaagagaag tgacaattcc
3541 actcagtcta ttagaggtct ggatataagg tagccacaca ataactctaa cttgacttct
3601 aaccattcta tcttattgat ttggaggctg tcttctgcca gattttttgt ggcttgagat
3661 gatattttcg aacccttctt tcactacctt tcttaccctt aatgtgccaa gcttgaaaca
3721 ggatttgatt tcctgagcta cttgttcgcc ttctgtgcgt caccaagtaa tctggttcat
3781 ctttcgtctc attcatgtta ttttcaagtg aaacaagaca ttttgggggt caagtctctt
3841 tgggtgtttt gtttttatgt atataaaaat ggattttgtg ttccctttcc atgtaagtac
3901 caacttatat ggaaactcac aatcataatg taaagaagaa atgaaagcct ggtgtattgt
3961 acttcaagat gcctccctga tgtatagaat ctccttgtaa aataaataat tgcattgtaa
4021 aaaaaaaaaa aaaaaaaaaa aaaaa
//