LOCUS BC021216 1322 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens potassium channel tetramerisation domain containing 9,
mRNA (cDNA clone MGC:12616 IMAGE:4302317), complete cds.
ACCESSION BC021216
VERSION BC021216.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1322)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1322)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC021216.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: n Column: 3.
FEATURES Location/Qualifiers
source 1..1322
/db_xref="H-InvDB:HIT000039147"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12616 IMAGE:4302317"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1322
/gene="KCTD9"
/gene_synonym="FLJ20038"
/db_xref="GeneID:54793"
/db_xref="HGNC:HGNC:22401"
CDS 26..1195
/gene="KCTD9"
/gene_synonym="FLJ20038"
/codon_start=1
/product="potassium channel tetramerisation domain
containing 9"
/protein_id="AAH21216.2"
/db_xref="GeneID:54793"
/db_xref="HGNC:HGNC:22401"
/translation="MRRVTLFLNGSPKNGKVVAVYGTLSDLLSVASSKLGIKATSVYN
GKGGLIDDIALIRDDDVLFVCEGEPFIDPQTDSKPPEGLLGFHTDWLTLNVGGRYFTT
TRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVN
DGINLLGVLEEARFFGIDSLIEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSEL
RCQGLNFSGADLSRLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQ
GVKMLCSNAEGASLKLCNFEDPSGLKANLEGANLKGVDMEGSQMTGINLRVATLKNAK
LKNCNLRGATLAGTDLENCDLSGCDLQEANLRGSNVKGAIFEEMLTPLHMSQSVR"
BASE COUNT 397 a 242 c 322 g 361 t
ORIGIN
1 ctcaggaccc agcgggggca gcgcgatgag gcgggtgacc ctgttcctga acggcagccc
61 caagaacgga aaggtggttg ctgtatatgg aactttatct gatttgcttt ctgtggccag
121 cagtaaactc ggcataaaag ccaccagtgt gtataatggg aaaggtggac tgattgatga
181 tattgctttg atcagggatg atgatgtttt gtttgtttgt gaaggagagc catttattga
241 tcctcagaca gattctaagc ctcctgaggg attgttagga ttccacacag actggctgac
301 attaaatgtt ggagggcggt actttacaac tacacggagc actttagtga ataaagaacc
361 tgacagtatg ctggcccaca tgtttaagga caaaggtgtc tggggaaata agcaagatca
421 tagaggagct ttcttaattg accgaagtcc tgagtacttc gaacccattt tgaactactt
481 gcgtcatgga cagctcattg taaatgatgg cattaattta ttgggtgtgt tagaagaagc
541 aagatttttt ggtattgact cattgattga acacctagaa gtggcaataa agaattctca
601 accaccggag gatcattcac caatatcccg aaaggaattt gtccgatttt tgctagcaac
661 tccaaccaag tcagaactgc gatgccaggg tttgaacttc agtggtgctg atctttctcg
721 tttggacctt cgatacatta acttcaaaat ggccaattta agccgctgta atcttgcaca
781 tgcaaatctt tgctgtgcaa atcttgaacg agctgatctc tctggatcag tgcttgactg
841 tgcgaatctc cagggagtca agatgctctg ttctaatgca gaaggagcat ccctgaaact
901 gtgtaatttt gaggatcctt ctggtcttaa agccaattta gaaggtgcta atctgaaagg
961 tgtggatatg gaaggaagtc agatgacagg aattaacctg agagtggcta ccttaaaaaa
1021 tgcaaagttg aagaactgta acctcagagg agcaactctg gcaggaactg atttagagaa
1081 ttgtgatctg tctgggtgtg atcttcaaga agccaacctg agagggtcca acgtgaaggg
1141 agctatattt gaagagatgc tgacaccact acacatgtca caaagtgtca gatgagaatt
1201 ttaggggctg gaggaagatg taaaagatga aaatgttttc cttatcactt ttctttctcc
1261 acccactcag ttgtctagaa gaaataacac tgtaaggaaa tttaaaaaaa aaaaaaaaaa
1321 aa
//