LOCUS BC021210 2442 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens netrin 5, mRNA (cDNA clone MGC:12924 IMAGE:4137205),
complete cds.
ACCESSION BC021210
VERSION BC021210.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2442)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2442)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC021210.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: j Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308064.
FEATURES Location/Qualifiers
source 1..2442
/db_xref="H-InvDB:HIT000050753"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12924 IMAGE:4137205"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2442
/gene="NTN5"
/db_xref="GeneID:126147"
/db_xref="HGNC:HGNC:25208"
CDS 117..1169
/gene="NTN5"
/codon_start=1
/product="NTN5 protein"
/protein_id="AAH21210.2"
/db_xref="GeneID:126147"
/db_xref="HGNC:HGNC:25208"
/translation="MPVTFALLLLLGQATADPCYDPQGRPQFCLPPVTQLAAVAASCP
QACALSPGNHLGARETCNGSLTLALGGPFLLTSVSLRFCTPGPPALILSAAWASGGPW
RLLWHRPAWPGALGGPERVTFHSTPGPKATVAASHLRVEFGGQAGLAAAGLRGRCQCH
GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHA
RRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQ
CHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRIPEATTTLAT
TPGAYSSGKTVWHGGP"
BASE COUNT 496 a 789 c 671 g 486 t
ORIGIN
1 cagccacgcc actccctcct gagagcccac cgcgccacag cttggaggaa gagcctgcgg
61 ggaactggct gcaggacgct ctcttcttga gtgcaggtgc tggctctgct gtgaccatgc
121 ccgtgacctt tgccctcctg ctcctcctgg gccaggccac tgcggaccca tgctacgatc
181 cacagggccg cccccaattc tgcctcccgc cagtgacaca gctggctgcc gtggcggcct
241 cctgccctca ggcctgtgcc ctgtccccag gaaaccacct tggcgccagg gaaacctgca
301 atggcagcct gactttggcc ctgggtggcc ccttcctcct gacatctgtc agcttgcgct
361 tctgtacccc aggaccccca gccctcatcc tgtctgctgc ctgggcctca gggggtccct
421 ggaggctgct gtggcacagg cccgcctggc ctggggcctt agggggccct gaaagggtga
481 ccttccactc cacaccaggt cctaaggcca ctgtggcggc cagccacctc cgtgtggagt
541 ttgggggcca ggccgggcta gcggcagctg ggctgagagg ccgctgccag tgtcatggcc
601 acgctgcccg ctgtgccgcc cgtgcccggc ccccccgctg ccactgccgc caccatacca
661 ctggcccggg gtgcgagagc tgccgcccgt cccatcgaga ctggccctgg cggcctgcca
721 cgccccggca cccccaccct tgcctaccct gctcctgcaa ccagcatgcc cgacgctgcc
781 ggttcaactc tgagctgttc agactgtcgg gcggccggag tgggggtgtt tgtgagcggt
841 gccgccacca cacagctggg cggcactgcc actactgcca acctgggttc tggagggacc
901 ctagccagcc tatcttcagc cgcagggcct gcagagcctg ccagtgccac cctattgggg
961 caacaggagg aacctgcaac cagaccagtg ggcagtgcac ctgcaagtta ggggtcacag
1021 gcctgacctg caaccgctgt ggccctggct accagcagag ccgctccccc aggatgccct
1081 gccagcgaat tccagaggca acaaccaccc ttgccactac tcctggtgct tatagctctg
1141 gtaagacagt ctggcacgga ggtccctgag tggcaagtgg gaatgaggat gggctgactg
1201 ggtccccaga tggggataca tgggtcaccc attgagccca gtcccaaagg tttgggtacc
1261 ccagctggcc atcaagatgg aacggaggga tgggcagggg cagaaggctg tggtctaggc
1321 cccaggagcc cactgcagac agcctgaccc tccccagacc ctcagtgtca aaactactgc
1381 aatatgtcgg acaccagggt acacatgagc cttcggaggt actgccagca ggaccatggt
1441 gagtgctggg gagacagaca gctgaaggct acacagctgg ttctgatgac tgcttctaag
1501 ccaccccctt tctggccttc cactttctca tcttaaatgg gaaggagtgt tggattccaa
1561 accccttcct gatctagaaa ttgatggggc agaagacaaa tggggagggg agtggggagg
1621 gggcattcac taccttcctg tgtctcctct ttccccatgt tcttcggctt acagagtttc
1681 atcatctcct tcagcctgac atctctgagg gatggaagag ataggggaac tggttgagtg
1741 gaatgaactc ttgccctgtc ctccctatct cagagaccct ttctgcttcc cttcatggtc
1801 ccagatattt gagccttagc cccacttccc ataaagactt gtcccacggt tccctaatcc
1861 ccagtccaca cctgctccat gaccttgggg tctatgacct caggctattc agctctctta
1921 agacactcag gagttcggcc cagccaacaa atctagacca acgccagcta tttctctcaa
1981 tgtataggac cgcagacttc tccctcagga acctcatctg gtcactagtg ttctaggcct
2041 tcacaggtgg aaagattttc cccaccttcc acagggatct cctgccccgc agacccagct
2101 ggctagtcag agtcccaccc agcctctcag aaagtgcatt tttctggccg ggcgcggtgg
2161 ctcatgctaa taatcccagc actttgtggg ggccgaggtg ggcggatcac ttgaggtcag
2221 gagttcgaga ccagcctggc caacatggtg aaactccatc tctactaaaa atacaaaaat
2281 tagccaggcg tggtggcagg atcctgtaaa cccagctgag gcacaagaat cacttcaacc
2341 tgggaggcag aggctgcagt gagttgagat cacaccactg cactccagac tgggcaatag
2401 agtaagattc cgtctcaaaa aaaaaaaaaa aaaaaaaaaa aa
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