LOCUS BC021202 2175 bp mRNA linear HUM 22-SEP-2005
DEFINITION Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae),
mRNA (cDNA clone IMAGE:4100336), partial cds.
ACCESSION BC021202
VERSION BC021202.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2175)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2175)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC021202.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: b Column: 5.
FEATURES Location/Qualifiers
source 1..2175
/db_xref="H-InvDB:HIT000090398"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4100336"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2175
/gene="ATG9A"
/gene_synonym="MGD3208"
/db_xref="GeneID:79065"
CDS <1..1061
/gene="ATG9A"
/gene_synonym="MGD3208"
/codon_start=3
/product="ATG9A protein"
/protein_id="AAH21202.2"
/db_xref="GeneID:79065"
/translation="LILIFCLRPRALEIIDFFRNFTVEVVGVGDTCSFAQMDVRQHGH
PQWLSAGQTEASVYQQAEDGKTELSLMHFAITNPGWQPPRESTAFLGFLKEQVQRDGA
AASLAQGGLLPENALFTSIQSLQSESEPLSLIANVVAGSSCRGPPLPRDLQGSRHRAE
VASALRSFSPLQPGQAPTGRAHSTMTGSGVDARTASSGSSVWEGQLQSLVLSEYASTE
MSLHALYMHQLHKQQAQAEPERHVWHRRESDESGESAPDEGGEGARAPQSIPRSASYP
CAAPRPGAPETTALHGGFQRRYGGITDPGTVPRVPSHFSRLPLGGWAEDGQSASRHPE
PVPEEGSEDELPPQVHKV"
BASE COUNT 446 a 670 c 619 g 440 t
ORIGIN
1 ccctcatcct catcttctgc ctgcgcccac gggccctgga gattatagac ttcttccgaa
61 acttcaccgt ggaggtcgtt ggtgtgggag atacctgctc ctttgctcag atggatgttc
121 gccagcatgg tcatccccag tggctatctg ctgggcagac agaggcctca gtgtaccagc
181 aagctgagga tggaaagaca gagttgtcac tcatgcactt tgccatcacc aaccctggct
241 ggcagccacc acgtgagagc acagccttcc taggcttcct caaggagcag gttcagcggg
301 atggagcagc tgctagcctc gcccaagggg gtctgctccc tgaaaatgcc ctctttacgt
361 ctatccagtc cttacaatct gagtctgagc ccctgagcct tatcgcaaat gtggtagctg
421 gctcatcctg ccggggccct ccactgccca gagacctgca gggctccagg cacagggctg
481 aagtcgcctc tgccctgcgc tccttctccc cgctgcaacc cgggcaggcg cccacaggcc
541 gggctcacag caccatgaca ggctctgggg tggatgccag gacagccagc tccgggagca
601 gcgtgtggga aggacagctg cagagcctgg tgctgtcaga atatgcatcc acagagatga
661 gcctgcatgc cctctatatg caccagctcc acaagcagca ggcccaggct gaacctgagc
721 ggcatgtatg gcaccgccgg gagagtgatg agagtggaga aagcgcccct gatgaagggg
781 gagagggcgc ccgggccccc cagtctatcc ctcgctctgc tagctatccc tgtgcagcac
841 cccggcctgg agctcctgag accaccgccc tgcatggggg cttccagagg cgctacggtg
901 gcatcacaga tcctggcaca gtgcccaggg ttccctctca tttctctcgg ctgcctcttg
961 gagggtgggc agaagatggg cagtcggcat caaggcaccc tgagcccgtg cccgaagagg
1021 gctcggagga tgagctaccc cctcaggtgc acaaggtata gacaaggctg agcagggttc
1081 ctgtggccca ggatggaggc caccgctgcc ctgccatccc gtctgcctgc catgggacgg
1141 ctcctctgag tgttccctgg ccccacgtgt gtggtgtttg tgtgtctgtg cctggccaag
1201 ggaggtgcca acactgggct tgccacagcc ccaggagagg aatttggggc ctaggaaccg
1261 agggcacacg ggactctagc ctcatcccca ggaccccctt ggctcagagt gtggtgctag
1321 aaactggtcc ccagcccagc cccagtactg ccacctttac acctacccct gcaagtcccc
1381 agagggctgc ccacgataga agctgccaag cagggagaac ctgtgccaac tgtggagtgg
1441 ggaggttggg cctggaccct caacccctgc aaccttccct agccccctca atagatgagc
1501 aggtcaggct gtggccctta cctcacccgc agttctcgcc cagtgctgca gccggctcac
1561 ctctctccgc ttcttgcaca tcactggcct gtgtgtgctg cttgctcctg ttctgttcgc
1621 ttgctcccgt tccgttcggc ttttgctttg cgttagggtg aagaccctag cgtccagctc
1681 ccctcaacgc tatattttga cactaaaaaa gaaggtttct aaattgtagg agcaggatgg
1741 aaatactttg ctgcccttgc catcttttag gatgggcccc caggagactg aggtcttcct
1801 gggccctcat tgctgcttat cgtacccccc atcacctgca catgggacag accgggctgg
1861 agggtgacct tggctgtgta cgtcccagca aaagagctct ggcccgcatc tcgctgtgcc
1921 ctgaaggggg atgaagggcg atgcctcgcc cgaggctttg ggctgctgca ctgcatgctg
1981 ggactgctcc tactctctgt cccacccctc acccagctgt ggtccggctt tgggagagtg
2041 gtgaattgcg ctgcccgaac tcggagcgga gcagggtagg gaccgtgtac agcttgataa
2101 cccttaataa aaagggagtt tgaccagaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaa
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