LOCUS BC021168 1383 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromatin modifying protein 5, mRNA (cDNA clone MGC:22857 IMAGE:3961351), complete cds. ACCESSION BC021168 VERSION BC021168.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1383) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1383) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 31 Row: i Column: 23. FEATURES Location/Qualifiers source 1..1383 /db_xref="H-InvDB:HIT000039114" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22857 IMAGE:3961351" /tissue_type="Bladder, carcinoma" /clone_lib="NIH_MGC_53" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1383 /gene="CHMP5" /gene_synonym="CGI-34" /gene_synonym="HSPC177" /gene_synonym="PNAS-2" /db_xref="GeneID:51510" /db_xref="HGNC:HGNC:26942" CDS 46..705 /gene="CHMP5" /gene_synonym="CGI-34" /gene_synonym="HSPC177" /gene_synonym="PNAS-2" /codon_start=1 /product="chromatin modifying protein 5" /protein_id="AAH21168.1" /db_xref="GeneID:51510" /db_xref="HGNC:HGNC:26942" /translation="MNRLFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVK YKDQIKKMREGPAKNMVKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDT KTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTPELDE DDLEAELDALGDELLADEDSSYLDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIPA S" BASE COUNT 449 a 220 c 296 g 418 t ORIGIN 1 ggggggtttt gctctagtgt ttgggtttct tcgcggctgc tcaagatgaa ccgactcttc 61 gggaaagcga aacccaaggc tccgccgccc agcctgactg actgcattgg cacggtggac 121 agtagagcag aatccattga caagaagatt tctcgattgg atgctgagct agtgaagtat 181 aaggatcaga tcaagaagat gagagagggt cctgcaaaga atatggtcaa gcagaaagcc 241 ttgcgagttt taaagcaaaa gaggatgtat gagcagcagc gggacaatct tgcccaacag 301 tcattcaaca tggaacaagc caattatacc atccagtctt tgaaggacac caagaccacg 361 gttgatgcta tgaaactggg agtaaaggaa atgaagaagg catacaagca agtgaagatc 421 gaccagattg aggatttaca agaccagcta gaggatatga tggaagatgc aaatgaaatc 481 caagaagcac tgagtcgcag ttatggcacc ccagaactgg atgaagatga tttagaagca 541 gagttggatg cactaggtga tgagcttctg gctgatgaag acagttctta tttggatgag 601 gcagcatctg cacctgcaat tccagaaggt gttcccactg atacaaaaaa caaggatgga 661 gttctggtgg atgaatttgg attgccacag atccctgctt catagatttg catcattcaa 721 gcatatcttg taaaacaaac acatattatg ggactaggaa atatttatct ttccaaattt 781 gccataacag attaggtttc tttcctttct ttgaaggaaa gtttaattac attgctcttt 841 tattttttcc attaagagac tcattgcttg ggaaatgctt tcttcgtact aaaatttgat 901 tccttttttt cttatgaaaa acgaactcag tttaaaagta tttttagctc gtatgacttg 961 ttttcattca ttaataataa tttgaaataa aactaaggaa atggaatctt aaaagtctat 1021 gacagtgtaa ctctacagtc tcaaaatgac ctgataaatt gataagacaa agatgagatt 1081 attggggctg ttcatattat gattcagaat cattttctat tgtggtatta taggttggtt 1141 aaagtgatgg cctttttgat gggttttgtt gtgtcttgtg aacaagtcgt tactgtgtcc 1201 attattggaa tggaattatc actactgtat catgagtggg tattttgatt ctatggttcc 1261 ctcagtatta catcttgact tgtaatcaat tatgaatatt tcttgatatt taatgtatag 1321 gacatttatt tatactcaat aaatattttt caataaaaaa aaaaaaaaaa aaaaaaaaaa 1381 aaa //