LOCUS BC021161 1330 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens phosphorylated adaptor for RNA export, mRNA (cDNA
clone MGC:14968 IMAGE:3833896), complete cds.
ACCESSION BC021161
VERSION BC021161.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1330)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1330)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC021161.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66392145.
FEATURES Location/Qualifiers
source 1..1330
/db_xref="H-InvDB:HIT000039111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14968 IMAGE:3833896"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1330
/gene="PHAX"
/db_xref="GeneID:51808"
/db_xref="HGNC:HGNC:10241"
/db_xref="MIM:604924"
CDS 23..1207
/gene="PHAX"
/codon_start=1
/product="phosphorylated adaptor for RNA export"
/protein_id="AAH21161.1"
/db_xref="GeneID:51808"
/db_xref="HGNC:HGNC:10241"
/db_xref="MIM:604924"
/translation="MALEVGDMEDGQLSDSDSDMTVAPSDRPLQLPKVLGGDSAMRAF
QNTATACAPVSHYRAVESVDSSEESFSDSDDDSCLWKRKRQKCFNPPPKPEPFQFGQS
SQKPPVAGGKKINNIWGAVLQEQNQDAVATELGILGMEGTIDRSRQSETYNYLLAKKL
RKESQEHTKDLDKELDEYMHGGKKMGSKEEENGQGHLKRKRPVKDRLGNRPEMNYKGR
YEITAEDSQEKVADEISFRLQEPKKDLIARVVRIIGNKKAIELLMETAEVEQNGGLFI
MNGSRRRTPGGVFLNLLKNTPSISEEQIKDIFYIENQKEYENKKAARKRRTQVLGKKM
KQAIKSLNFQEDDDTSRETFASDTNEALASLDESQEGHAEAKLEAEEAIEVDHSHDLD
IF"
BASE COUNT 473 a 235 c 327 g 295 t
ORIGIN
1 cagcgcagcg caccgcggga agatggcgtt ggaggtcggc gatatggaag atgggcagct
61 ttccgactcg gattccgaca tgacggtcgc acccagcgac aggccgctgc aattgccaaa
121 agtgctaggt ggcgacagtg ctatgagggc cttccagaac acggcaactg catgtgcacc
181 agtatcacat tatcgagctg ttgaaagtgt ggattcaagt gaagaaagtt tttctgattc
241 agatgatgat agctgtcttt ggaaacgcaa acgacagaaa tgttttaacc ctcctcccaa
301 accagagcct tttcagtttg gccagagcag tcagaaacca cctgttgctg gaggaaagaa
361 gattaacaac atatggggtg ctgtgctgca ggaacagaat caagatgcag tggccactga
421 acttggtatc ttgggaatgg agggcactat tgacagaagc agacaatccg agacctacaa
481 ttatttgctt gccaagaaac ttaggaagga atctcaagag catacaaaag atctagacaa
541 ggaactagat gaatatatgc atggtggcaa aaaaatggga tcaaaggaag aggaaaatgg
601 gcaaggtcat ctcaaaagga aacgacctgt caaagacagg ctagggaaca gaccagaaat
661 gaactataaa ggtcgatacg agatcacagc ggaagattct caagagaaag tggctgatga
721 aatttcattc aggttacagg aaccaaagaa agacctgata gcccgagtag tgaggattat
781 tggtaacaaa aaggcaattg aacttctgat ggaaaccgct gaagttgaac aaaatggtgg
841 tctctttata atgaatggta gtcgaagaag aacaccaggt ggagtttttc tgaatctctt
901 gaaaaacact cctagtatca gcgaggaaca aattaaggac attttctaca ttgaaaacca
961 aaaggaatat gaaaataaaa aagctgctag gaagaggaga acacaagtgt tggggaaaaa
1021 gatgaaacaa gctattaaaa gtctaaattt tcaagaagat gatgatacat cacgagaaac
1081 ttttgcaagt gacacgaatg aggccttggc ctctcttgat gagtcacagg aaggacatgc
1141 agaagccaag ttggaggcag aggaagccat tgaagttgat cattctcatg atttggacat
1201 cttttaagta cattttcaac agtttgagga ctaagccttt ctaaaataac attgtaataa
1261 accattttta ctgagattgc aacgttttgc actgataaac atgagaatct ggaaaaaaaa
1321 aaaaaaaaaa
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