LOCUS BC021118 684 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens paroxysmal nonkinesigenic dyskinesia, mRNA (cDNA clone IMAGE:4861213), complete cds. ACCESSION BC021118 VERSION BC021118.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 684) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 684) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: j Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37059800 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..684 /db_xref="H-InvDB:HIT000039098" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4861213" /tissue_type="Skin, melanotic melanoma, high MDR." /clone_lib="NIH_MGC_49" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..684 /gene="PNKD" /gene_synonym="BRP17" /gene_synonym="DKFZp564N1362" /gene_synonym="DYT8" /gene_synonym="FKSG19" /gene_synonym="FPD1" /gene_synonym="KIPP1184" /gene_synonym="MR-1" /gene_synonym="MR1" /gene_synonym="PDC" /gene_synonym="TAHCCP2" /db_xref="GeneID:25953" /db_xref="HGNC:HGNC:9153" /db_xref="MIM:609023" CDS 32..460 /gene="PNKD" /gene_synonym="BRP17" /gene_synonym="DKFZp564N1362" /gene_synonym="DYT8" /gene_synonym="FKSG19" /gene_synonym="FPD1" /gene_synonym="KIPP1184" /gene_synonym="MR-1" /gene_synonym="MR1" /gene_synonym="PDC" /gene_synonym="TAHCCP2" /codon_start=1 /product="paroxysmal nonkinesigenic dyskinesia" /protein_id="AAH21118.1" /db_xref="GeneID:25953" /db_xref="HGNC:HGNC:9153" /db_xref="MIM:609023" /translation="MAAVVAATALKGRGARNARVLRGILAGATANKASHNRTRALQSH SSPEGKEEPEPLSPELEYIPRKRGKNPMKAVGLAWAIGFPCGILLFILTKREVDKDRV KQMKARQNMRLSNTGEYESQRFRASSQSAPSPDVGSGVQT" BASE COUNT 186 a 181 c 204 g 113 t ORIGIN 1 gagcgcggtg aagcgggggt gggatctgaa catggcggcg gtggtagctg ctacggcgct 61 gaagggccgg ggggcgagaa atgcccgcgt cctccggggg attctcgcag gagccacagc 121 taacaaggct tctcataaca ggacccgggc cctgcaaagc cacagctccc cagagggcaa 181 ggaggaacct gaacccctat ccccggagct ggaatacatt cccagaaaga ggggcaagaa 241 ccccatgaaa gctgtgggac tggcctgggc catcggcttc ccttgtggta tcctcctctt 301 catcctcacc aagcgggaag tggacaagga ccgtgtgaag cagatgaagg ctcggcagaa 361 catgcggttg tccaacacgg gcgagtatga gagccagagg ttcagggctt cctcccagag 421 tgccccgtcc cctgatgttg ggtctggggt gcagacctga ggagcgctgc gaccctccta 481 ggctattgac tgttaagtcc tcaggtttgg cccagattcc agttcgtgcc tctgaggtcc 541 accagagggc gcatgaagcc caggctgttg ccaaacccta ccctgcccca caccaaggag 601 ccagccaaag gcaaataaag ttattgagtg tttagtagaa agggaaaaaa aaaaaaaaaa 661 aaaaaaaaaa aaaaaaaaaa aaaa //