LOCUS BC021117 2851 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens colony stimulating factor 1 (macrophage), mRNA (cDNA clone MGC:31930 IMAGE:4586312), complete cds. ACCESSION BC021117 VERSION BC021117.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2851) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2851) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: f Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27262660. FEATURES Location/Qualifiers source 1..2851 /db_xref="H-InvDB:HIT000039097" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:31930 IMAGE:4586312" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2851 /gene="CSF1" /gene_synonym="MCSF" /gene_synonym="MGC31930" /db_xref="GeneID:1435" /db_xref="HGNC:HGNC:2432" /db_xref="MIM:120420" CDS 190..1854 /gene="CSF1" /gene_synonym="MCSF" /gene_synonym="MGC31930" /codon_start=1 /product="colony stimulating factor 1 (macrophage)" /protein_id="AAH21117.1" /db_xref="GeneID:1435" /db_xref="HGNC:HGNC:2432" /db_xref="MIM:120420" /translation="MTAPGAAGRCPPTTWLGSLLLLVCLLASRSITEEVSEYCSHMIG SGHLQSLQRLIDSQMETSCQITFEFVDQEQLKDPVCYLKKAFLLVQDIMEDTMRFRDN TPNAIAIVQLQELSLRLKSCFTKDYEEHDKACVRTFYETPLQLLEKVKNVFNETKNLL DKDWNIFSKNCNNSFAECSSQDVVTKPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPV AGLTWEDSEGTEGSSLLPGEQPLHTVDPGSAKQRPPRSTCQSFEPPETPVVKDSTIGG SPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPGGGSMQ TEPARPSNFLSASSPLPASAKGQQPADVTGTALPRVGPVRPTGQDWNHTPQKTDHPSA LLRDPPEPGSPRISSLRPQGLSNPSTLSAQPQLSRSHSSGSVLPLGELEGRRSTRDRR SPAEPEGGPASEGAARPLPRFNSVPLTDTGHERQSEGSSSPQLQESVFHLLVPSVILV LLAVGGLLFYRWRRRSHQEPQRADSPLEQPEGSPLTQDDRQVELPV" BASE COUNT 650 a 904 c 797 g 500 t ORIGIN 1 gagggctggc cagtgaggct cggcccgggg aaagtgaaag tttgcctggg tcctctcggc 61 gccagagccg ctctccgcat cccaggacag cggtgcggcc ctcggccggg gcgcccactc 121 cgcagcagcc agcgagcgag cgagcgagcg agggcggccg acgcgcccgg ccgggaccca 181 gctgcccgta tgaccgcgcc gggcgccgcc gggcgctgcc ctcccacgac atggctgggc 241 tccctgctgt tgttggtctg tctcctggcg agcaggagta tcaccgagga ggtgtcggag 301 tactgtagcc acatgattgg gagtggacac ctgcagtctc tgcagcggct gattgacagt 361 cagatggaga cctcgtgcca aattacattt gagtttgtag accaggaaca gttgaaagat 421 ccagtgtgct accttaagaa ggcatttctc ctggtacaag acataatgga ggacaccatg 481 cgcttcagag ataacacccc caatgccatc gccattgtgc agctgcagga actctctttg 541 aggctgaaga gctgcttcac caaggattat gaagagcatg acaaggcctg cgtccgaact 601 ttctatgaga cacctctcca gttgctggag aaggtcaaga atgtctttaa tgaaacaaag 661 aatctccttg acaaggactg gaatattttc agcaagaact gcaacaacag ctttgctgaa 721 tgctccagcc aagatgtggt gaccaagcct gattgcaact gcctgtaccc caaagccatc 781 cctagcagtg acccggcctc tgtctcccct catcagcccc tcgccccctc catggcccct 841 gtggctggct tgacctggga ggactctgag ggaactgagg gcagctccct cttgcctggt 901 gagcagcccc tgcacacagt ggatccaggc agtgccaagc agcggccacc caggagcacc 961 tgccagagct ttgagccgcc agagacccca gttgtcaagg acagcaccat cggtggctca 1021 ccacagcctc gcccctctgt cggggccttc aaccccggga tggaggatat tcttgactct 1081 gcaatgggca ctaattgggt cccagaagaa gcctctggag aggccagtga gattcccgta 1141 ccccaaggga cagagctttc cccctccagg ccaggagggg gcagcatgca gacagagccc 1201 gccagaccca gcaacttcct ctcagcatct tctccactcc ctgcatcagc aaagggccaa 1261 cagccggcag atgtaactgg tacagccttg cccagggtgg gccccgtgag gcccactggc 1321 caggactgga atcacacccc ccagaagaca gaccatccat ctgccctgct cagagacccc 1381 ccggagccag gctctcccag gatctcatca ctgcgccccc agggcctcag caacccctcc 1441 accctctctg ctcagccaca gctttccaga agccactcct cgggcagcgt gctgcccctt 1501 ggggagctgg agggcaggag gagcaccagg gatcggagga gccccgcaga gccagaagga 1561 ggaccagcaa gtgaaggggc agccaggccc ctgccccgtt ttaactccgt tcctttgact 1621 gacacaggcc atgagaggca gtccgaggga tcctccagcc cgcagctcca ggagtctgtc 1681 ttccacctgc tggtgcccag tgtcatcctg gtcttgctgg ccgtcggagg cctcttgttc 1741 tacaggtgga ggcggcggag ccatcaagag cctcagagag cggattctcc cttggagcaa 1801 ccagagggca gccccctgac tcaggatgac agacaggtgg aactgccagt gtagagggaa 1861 ttctaagctg gacgcacaga acagtctctc cgtgggagga gacattatgg ggcgtccacc 1921 accacccctc cctggccatc ctcctggaat gtggtctgcc ctccaccaga gctcctgcct 1981 gccaggactg gaccagagca gccaggctgg ggcccctctg tctcaacccg cagacccttg 2041 actgaatgag agaggccaga ggatgctccc catgctgcca ctatttattg tgagccctgg 2101 aggctcccat gtgcttgagg aaggctggtg agcccggctc aggaccctct tccctcaggg 2161 gctgcaccct cctctcactc ccttccatgc cggaacccag gccagggacc caccggcctg 2221 tggtttgtgg gaaagcaggg tggacgctga ggagtgaaag aaccctgcac ccagagggcc 2281 tgcctggtgc caaggtatcc cagcctggac aggcatggac ctgtctccag agagaggagc 2341 ctgaagttcg tggggcggga cagcgtcggc ctgatttccc gtaaaggtgt gcagcctgag 2401 agacgggaag aggaggcctc tggacctgct ggtctgcact gacagcctga agggtctaca 2461 ccctcggctc acctaagtgc cctgtgctgg ttgccaggcg cagaggggag gccagccctg 2521 ccctcaggac ctgcctgacc tgccagtgat gccaagaggg ggatcaagca ctggcctctg 2581 cccctcctcc ttccagcacc tgccagagct tctccaggag gccaagcaga ggctcccctc 2641 atgaaggaag ccattgcact gtgaacactg tacctgcctg ctgaacagcc tgcccccgtc 2701 catccatgag ccagcatccg tccgtcctcc actctccagc ctctccccat ggcctccatg 2761 acttttttca aaaaaaaaaa aaaaaaaaaa aataaaaaaa aaaaaaaaaa aaaaaaaaaa 2821 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //