LOCUS       BC021108                2027 bp    mRNA    linear   HTC 08-DEC-2006
DEFINITION  Homo sapiens sorting nexin 17, mRNA (cDNA clone IMAGE:4622841),
            with apparent retained intron.
ACCESSION   BC021108
VERSION     BC021108.1
KEYWORDS    HTC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2027)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JAN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP/Gazdar
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 40 Row: f Column: 6
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 23238249
            This clone has the following problem: retained intron.
FEATURES             Location/Qualifiers
     source          1..2027
                     /db_xref="H-InvDB:HIT000090365"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4622841"
                     /tissue_type="Lung, large cell carcinoma"
                     /clone_lib="NIH_MGC_18"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
BASE COUNT          449 a          529 c          593 g          456 t
ORIGIN      
        1 gggctcccaa aatggcgagt gaggctgcgg ggactcgctg agcagcggag ggggagcgtg
       61 cagagccgct gcggccctca cagtccggag cccggccgtg ccgtgccgta gggaacatgc
      121 acttttccat tcccgaaacc gagtcccgca gcggggacag cggcggctcc gcctacgtgg
      181 cctataacat tcacgtgaat ggagtcctgc actgtcgggt gcgctacagc cagctcctgg
      241 ggctgcacga gcagcttcgg aaggagtatg gggccaatgt gcttcctgca ttccccccaa
      301 agaagctttt ctctctgact cctgctgagg tagaacagag gagagagcag ttagagaagt
      361 acatgcaagc tgttctatag actggactca cctagatggc agccaagggt ggggcaggtg
      421 aagaatttat gcaaacagtg agtgagttcg gcaagaccca ttgcttggga gcagcgagac
      481 tttcaacagt ttcctgcgtc gggcacaaca ggagacacag caggtcccca cagaggaagt
      541 gtccttggaa gtgctgctca gcaacgggca gaaagttctg gtcaacgtgc taacttcaga
      601 tcagactgag gatgtcctgg aggctgtagc tgcaaagctg gatcttccag atgacttgat
      661 tggatacttt agtctattct tagttcgaga aaaagaggat ggagcctttt cttttgtacg
      721 gaagttgcaa gagtttgagc tgccttatgt gtctgtcacc agccttcgga gtcaagagta
      781 taagattgtg ctaaggaaga gttattggga ctctgcctat gatgacgatg tcatggagaa
      841 ccgggttggc ctgaacctgc tttatgctca gacggtatca gatattgagc gtgggtggat
      901 cttggtcacc aaggaacagc accggcaact caaatctctg caagagaaag tctccaagaa
      961 ggagttcctg agactggccc agacgctgcg gcactatggc tacttgcgct ttgatgcctg
     1021 tgtggctgac ttcccagaaa aggactgtcc tgtggtggtg agcgcgggca acagtgagct
     1081 cagcctgcag ctccgcctgc ctggccagca actccgagaa ggctccttcc gggtcacccg
     1141 catgcgatgc tggcgggtca cctcctctgt accattgccc agtggaagca cgagcagccc
     1201 aggccggggc cggggtgagg tgcgcctgga actggctttt gaatacctca tgagcaagga
     1261 ccggctacag tgggtcacca tcactagccc ccaggctatc atgatgagca tctgcttgca
     1321 gtccatggtt gatgaactga tggtgaagaa atctggcggc agtatcagga agatgctgcg
     1381 ccggcgggtg gggggtactc tgagacgctc agacagccag caagcagtga agtccccacc
     1441 actgcttgag tcacctgatg ccacccggga gtctatggtc aaactctcaa gtaagctgag
     1501 tgccgtgagc ttgcggggaa ttggcagtcc cagcacagat gccagtgcca gtgatgtcca
     1561 cggcaatttc gccttcgagg gcattggaga tgaggatctg taatctccac tgcttggatg
     1621 tctgccctct accccagagg aatttacaga aacttgccct gtgcctgtgt cccccatgct
     1681 aggggcggag gggtcttttc cttcttcttt cctacctacc ccttttctct tggccagggg
     1741 cctcgtatcc tacctttcct tgtcccctgg gctggctgca cagaggattg ccccttctct
     1801 tttcagagct ggccctcgat gccaaattag catttagtat tttgcacaaa gtctaaggga
     1861 ccatggctgc ctgccttggg gaggaaccat atctccctct gggccgcttc tggcctcttg
     1921 gagccatggg ccaaaggcca aggggatggg cagaggtctg tgtttggtct ggcccagttc
     1981 cccatcatta aactcagcct gactgctaaa aaaaaaaaaa aaaaaaa
//